RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 ECM1Q16610 540 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 SLC44A4Q53GD3 710 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 ITFG1Q8TB96 612 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 NELL2Q99435 816 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 GOLGA2P5Q9HBQ8 144 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 DLGAP2Q9P1A6 1054 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.09□□□□□ -0.31
GTF3A-205ENST00000466776 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
GTF3A-205ENST00000466776 TCHHQ07283 1943 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ECI2O75521 394 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 RHOP08100 348 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ATF2P15336 505 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 KCNE1P15382 129 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.32
GTF3A-205ENST00000466776 PRPHP41219 470 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 BRCC3P46736 316 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ROR1Q01973 937 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 XKR4Q5GH76 650 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
GTF3A-205ENST00000466776 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 IQCEQ6IPM2 695 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ZNF280DQ6N043 979 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 DTHD1Q6ZMT9 781 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 CEP120Q8N960 986 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 APPL2Q8NEU8 664 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
GTF3A-205ENST00000466776 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
GTF3A-205ENST00000466776 POLD4Q9HCU8 107 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 FBXO4Q9UKT5 387 aa13.08□□□□□ -0.32
GTF3A-205ENST00000466776 FAM170BA6NMN3 283 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 E9PMD0 336 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 H0YCG3 227 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 I3L4J1 428 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 SPTLC1O15269 473 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
GTF3A-205ENST00000466776 MCM4P33991 863 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ARPP19P56211 112 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 NBR1Q14596 966 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.32
GTF3A-205ENST00000466776 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ZBTB41Q5SVQ8 909 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ALKAL1Q6UXT8 129 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ZNF852Q6ZMS4 543 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 TPRG1Q6ZUI0 275 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 PDZD4Q76G19 769 aaPredicted RBP13.07□□□□□ -0.32
GTF3A-205ENST00000466776 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 C3orf58Q8NDZ4 430 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 RUBCNQ92622 972 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 MCRS1Q96EZ8 462 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 LTB4R2Q9NPC1 389 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 ANK1P16157 1881 aa13.07□□□□□ -0.32
GTF3A-205ENST00000466776 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 SLC16A4O15374 487 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 TOM1L1O75674 476 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 MICAL2O94851 1124 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 ABLIM3O94929 683 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 PROZP22891 400 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 SOX4Q06945 474 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 ZRSR1Q15695 479 aaKnown RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 ZNF512Q96ME7 567 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 RUSC1Q9BVN2 902 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
GTF3A-205ENST00000466776 BRD9Q9H8M2 597 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 ZFP14Q9HCL3 533 aa13.06□□□□□ -0.32
GTF3A-205ENST00000466776 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms