RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CELF3Q5SZQ8 465 aaKnown RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 ATG9AQ7Z3C6 839 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 ARFGAP2Q8N6H7 521 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 MCOLN3Q8TDD5 553 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 RBM41Q96IZ5 413 aaKnown RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 PGBD1Q96JS3 809 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 MCOLN1Q9GZU1 580 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 FANCFQ9NPI8 374 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SUN2Q9UH99 717 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 FBXO10Q9UK96 956 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 PGK1P00558 417 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 CYP2A6P11509 494 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 INSRRP14616 1297 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SYT1P21579 422 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SLC24A5Q71RS6 500 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 AOPEPQ8N6M6 819 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 PPFIBP2Q8ND30 876 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SYTL5Q8TDW5 730 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 DNAJB3Q8WWF6 145 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 HAUS8Q9BT25 410 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 RPN2P04844 631 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 LGALS2P05162 132 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 HALP42357 657 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 MAPK8P45983 427 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
SCAF11-205ENST00000465950 NFIAQ12857 509 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 COLEC12Q5KU26 742 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 BSPRYQ5W0U4 402 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 PDCL2Q8N4E4 241 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 ACER1Q8TDN7 264 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 HAPLN3Q96S86 360 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 CYP3A43Q9HB55 503 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SLC39A2Q9NP94 309 aa10.02□□□□□ -0.81
SCAF11-205ENST00000465950 SMIM35A0A1B0GVV1 85 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 TTI1O43156 1089 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 MLYCDO95822 493 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 SETSIPP0DME0 302 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PTGS1P23219 599 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 ZNF135P52742 658 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 TMEM62Q0P6H9 643 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 IGSF22Q8N9C0 903 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 DDI1Q8WTU0 396 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PDCD6IPQ8WUM4 868 aaKnown RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 OMDQ99983 421 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 YIPF2Q9BWQ6 316 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 CDY2AQ9Y6F7 541 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 LAMTOR5O43504 91 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 EXTL3O43909 919 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 HIP1RO75146 1068 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 CYP21A2P08686 494 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 IRF1P10914 325 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 CYP11B2P19099 503 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 DUSP3P51452 185 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 POLR2LP62875 67 aaKnown RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 TLE2Q04725 743 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PSMD6Q15008 389 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 WDR45BQ5MNZ6 344 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 FRA10AC1Q70Z53 315 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PHC3Q8NDX5 983 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PPTC7Q8NI37 304 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PTPN22Q9Y2R2 807 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 ASB3Q9Y575 518 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 HIST1H2AGP0C0S8 130 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 HIST1H2ADP20671 130 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 LRRC69Q6ZNQ3 347 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 CDKL3Q8IVW4 592 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 KRT35Q92764 455 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 ZNF653Q96CK0 615 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PAWRQ96IZ0 340 aaKnown RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 HIST1H2AHQ96KK5 128 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 HIST1H2AJQ99878 128 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 H2AFJQ9BTM1 129 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 ASB7Q9H672 318 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 GIMAP4Q9NUV9 329 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 MOCS2O96007 188 aaPredicted RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 KRT3P12035 628 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PSMA2P25787 234 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 DDX6P26196 483 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 VAMP7P51809 220 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 SLC39A14Q15043 492 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 KCNA10Q16322 511 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 APOBEC3HQ6NTF7 200 aaKnown RBP10.01□□□□□ -0.81
SCAF11-205ENST00000465950 CIPCQ9C0C6 399 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
SCAF11-205ENST00000465950 I3L4J1 428 aa10□□□□□ -0.81
SCAF11-205ENST00000465950 RLBP1P12271 317 aa10□□□□□ -0.81
SCAF11-205ENST00000465950 CCNE1P24864 410 aa10□□□□□ -0.81
SCAF11-205ENST00000465950 SULT2A1Q06520 285 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms