RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 ZNF461Q8TAF7 563 aa22.81■■□□□ 1.24
CSPG5-204ENST00000465441 CDK5RAP3Q96JB5 506 aa22.81■■□□□ 1.24
CSPG5-204ENST00000465441 TBC1D4O60343 1298 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 ABLIM3O94929 683 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 ROR1Q01973 937 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 MRPL58Q14197 206 aaKnown RBP22.8■■□□□ 1.24
CSPG5-204ENST00000465441 SLC8B1Q6J4K2 584 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 ZPBP2Q6X784 338 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 TBC1D17Q9HA65 648 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 KCND2Q9NZV8 630 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 ANKFY1Q9P2R3 1169 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 SMC3Q9UQE7 1217 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 NUB1Q9Y5A7 615 aa22.8■■□□□ 1.24
CSPG5-204ENST00000465441 SYN3O14994 580 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 CLDN3O15551 220 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 RFX1P22670 979 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 MCM2P49736 904 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 ARPP19P56211 112 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 MCL1Q07820 350 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 NOLC1Q14978 699 aaKnown RBP eCLIP22.79■■□□□ 1.24
CSPG5-204ENST00000465441 ANGPT1Q15389 498 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 PABPC1LQ4VXU2 614 aaKnown RBP22.79■■□□□ 1.24
CSPG5-204ENST00000465441 LARP1BQ659C4 914 aaKnown RBP22.79■■□□□ 1.24
CSPG5-204ENST00000465441 PHLDB3Q6NSJ2 640 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 HAPLN2Q9GZV7 340 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 ARHGEF3Q9NR81 526 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 KCNH3Q9ULD8 1083 aa22.79■■□□□ 1.24
CSPG5-204ENST00000465441 USP34Q70CQ2 3546 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 WDR27A2RRH5 827 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 ELF1P32519 619 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 MTSS1LQ765P7 747 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 FRMD5Q7Z6J6 570 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 AK8Q96MA6 479 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 NOTCH4Q99466 2003 aa22.78■■□□□ 1.24
CSPG5-204ENST00000465441 LARSQ9P2J5 1176 aaKnown RBP22.78■■□□□ 1.24
CSPG5-204ENST00000465441 ARHGEF37A1IGU5 675 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 H7C4K7 107 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 DCNP07585 359 aaKnown RBP22.77■■□□□ 1.24
CSPG5-204ENST00000465441 RHOP08100 348 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.24
CSPG5-204ENST00000465441 NCKAP1LP55160 1127 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 SPAG1Q07617 926 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 HAUS6Q7Z4H7 955 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 NPAS3Q8IXF0 933 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 TMEM130Q8N3G9 435 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 LRRC15Q8TF66 581 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 MCRS1Q96EZ8 462 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 SUSD3Q96L08 255 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
CSPG5-204ENST00000465441 FBXL5Q9UKA1 691 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 MRPS23Q9Y3D9 190 aaKnown RBP22.77■■□□□ 1.24
CSPG5-204ENST00000465441 SIT1Q9Y3P8 196 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.77■■□□□ 1.24
CSPG5-204ENST00000465441 CITO14578 2027 aa22.77■■□□□ 1.24
CSPG5-204ENST00000465441 MYH11P35749 1972 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 PRR23AA6NEV1 266 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 SLC26A4O43511 780 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 SEC24AO95486 1093 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 ATF2P15336 505 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 PTPN2P17706 415 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 UBA7P41226 1012 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 STARD6P59095 220 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 DHX8Q14562 1220 aaKnown RBP22.76■■□□□ 1.23
CSPG5-204ENST00000465441 POTEHQ6S545 545 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 ING5Q8WYH8 240 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 DDX12PQ92771 950 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 CALML4Q96GE6 196 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 TBC1D32Q96NH3 1257 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 PLEKHA5Q9HAU0 1116 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 CYP4F11Q9HBI6 524 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 BLOC1S4Q9NUP1 217 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 TUBGCP4Q9UGJ1 667 aa22.76■■□□□ 1.23
CSPG5-204ENST00000465441 H0YCG3 227 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 PRRG1O14668 218 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 LRG1P02750 347 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 CXCL8P10145 99 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 MCM4P33991 863 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 GRIN1Q05586 938 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 SNW1Q13573 536 aaKnown RBP22.75■■□□□ 1.23
CSPG5-204ENST00000465441 ZBTB6Q15916 424 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 SLC5A9Q2M3M2 681 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 CTXN3Q4LDR2 81 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 SPECC1Q5M775 1068 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 KCNN1Q92952 543 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 NKD2Q969F2 451 aaPredicted RBP22.75■■□□□ 1.23
CSPG5-204ENST00000465441 BICD1Q96G01 975 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 REEP2Q9BRK0 252 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 AVENQ9NQS1 362 aaPredicted RBP22.75■■□□□ 1.23
CSPG5-204ENST00000465441 DLGAP2Q9P1A6 1054 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 ODF2LQ9ULJ1 636 aa22.75■■□□□ 1.23
CSPG5-204ENST00000465441 TTC26A0AVF1 554 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 CLTAP09496 248 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 MARCKSP29966 332 aaPredicted RBP22.74■■□□□ 1.23
CSPG5-204ENST00000465441 TNFSF9P41273 254 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 SLC44A4Q53GD3 710 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 GPBP1Q86WP2 473 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 TCEAL8Q8IYN2 117 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 MYCT1Q8N699 235 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 APPL2Q8NEU8 664 aa22.74■■□□□ 1.23
CSPG5-204ENST00000465441 SHDQ96IW2 340 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms