RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 DSG1Q02413 1049 aa19.14■□□□□ 0.65
UFM1-204ENST00000464423 BMS1Q14692 1282 aaKnown RBP19.14■□□□□ 0.65
UFM1-204ENST00000464423 KIAA1841Q6NSI8 718 aa19.14■□□□□ 0.65
UFM1-204ENST00000464423 PRSS55Q6UWB4 352 aaPredicted RBP19.14■□□□□ 0.65
UFM1-204ENST00000464423 CEP57Q86XR8 500 aa19.14■□□□□ 0.65
UFM1-204ENST00000464423 RIN2Q8WYP3 895 aaPredicted RBP19.14■□□□□ 0.65
UFM1-204ENST00000464423 DDX27Q96GQ7 796 aaKnown RBP19.14■□□□□ 0.65
UFM1-204ENST00000464423 CDCA3Q99618 268 aaPredicted RBP19.14■□□□□ 0.65
UFM1-204ENST00000464423 HCFC2Q9Y5Z7 792 aa19.14■□□□□ 0.65
UFM1-204ENST00000464423 SF3B1O75533 1304 aaKnown RBP eCLIP19.14■□□□□ 0.65
UFM1-204ENST00000464423 TMEM189-UBE2V1I3L0A0 370 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 TEX28O15482 410 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 EPCAMP16422 314 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 PSMD2Q13200 908 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 USP41Q3LFD5 358 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 LEXMQ3ZCV2 418 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 TMEM87AQ8NBN3 555 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 IPO9Q96P70 1041 aaKnown RBP19.13■□□□□ 0.65
UFM1-204ENST00000464423 HSPBP1Q9NZL4 362 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 STK39Q9UEW8 545 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 UBQLN1Q9UMX0 589 aaKnown RBP19.13■□□□□ 0.65
UFM1-204ENST00000464423 MAPK8IP1Q9UQF2 711 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 UBE4BO95155 1302 aa19.13■□□□□ 0.65
UFM1-204ENST00000464423 EXTL3O43909 919 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 RHOBTB3O94955 611 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 BMP1P13497 986 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 KLRC2P26717 231 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 TKTP29401 623 aaKnown RBP19.12■□□□□ 0.65
UFM1-204ENST00000464423 RPL9P32969 192 aaKnown RBP19.12■□□□□ 0.65
UFM1-204ENST00000464423 CYP2J2P51589 502 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 TMEM132DQ14C87 1099 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 KNOP1Q1ED39 458 aaKnown RBP19.12■□□□□ 0.65
UFM1-204ENST00000464423 SPATA1Q5VX52 437 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 SCARA3Q6AZY7 606 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 KANK3Q6NY19 840 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 CBWD2Q8IUF1 395 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 GLYCTKQ8IVS8 523 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 BRSK2Q8IWQ3 736 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 CD302Q8IX05 232 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 GPD1LQ8N335 351 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 FEZF2Q8TBJ5 459 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 SLC22A17Q8WUG5 538 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 MSLNLQ96KJ4 702 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 TTPALQ9BTX7 342 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 APOL5Q9BWW9 433 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
UFM1-204ENST00000464423 CITO14578 2027 aa19.12■□□□□ 0.65
UFM1-204ENST00000464423 PRPF40AO75400 957 aaKnown RBP19.11■□□□□ 0.65
UFM1-204ENST00000464423 LRPAP1P30533 357 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 TJAP1Q5JTD0 557 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 SMYD4Q8IYR2 804 aaPredicted RBP19.11■□□□□ 0.65
UFM1-204ENST00000464423 RDH13Q8NBN7 331 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 EMILIN2Q9BXX0 1053 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 KCTD10Q9H3F6 313 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 ASB7Q9H672 318 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 RXFP1Q9HBX9 757 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 PDE11AQ9HCR9 933 aa19.11■□□□□ 0.65
UFM1-204ENST00000464423 PTPRJQ12913 1337 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 BRWD1Q9NSI6 2320 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 GRXCR2A6NFK2 248 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 ADAM12O43184 909 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 LDHAP00338 332 aaKnown RBP19.1■□□□□ 0.65
UFM1-204ENST00000464423 CYP3A5P20815 502 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 FGFR3P22607 806 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 CLCN4P51793 760 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 KCNB1Q14721 858 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 AAK1Q2M2I8 961 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 PTCRAQ6ISU1 281 aaPredicted RBP19.1■□□□□ 0.65
UFM1-204ENST00000464423 SYCE2Q6PIF2 218 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 TMEM184AQ6ZMB5 413 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.1■□□□□ 0.65
UFM1-204ENST00000464423 HS2ST1Q7LGA3 356 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 BEST2Q8NFU1 509 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 LNX1Q8TBB1 728 aaPredicted RBP19.1■□□□□ 0.65
UFM1-204ENST00000464423 TIGD1Q96MW7 591 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 NECAB3Q96P71 396 aaPredicted RBP19.1■□□□□ 0.65
UFM1-204ENST00000464423 CD207Q9UJ71 328 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 CDH22Q9UJ99 828 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 DERAQ9Y315 318 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 NUB1Q9Y5A7 615 aa19.1■□□□□ 0.65
UFM1-204ENST00000464423 PDCD11Q14690 1871 aaKnown RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 SPTLC1O15269 473 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 IL18RAPO95256 599 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 SPATA31D3P0C874 917 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 IL9P15248 144 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 MCM4P33991 863 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 TFAMQ00059 246 aaKnown RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 POU5F1Q01860 360 aaKnown RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 ELAVL2Q12926 359 aaKnown RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 C9orf57Q5W0N0 161 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 LMBRD2Q68DH5 695 aaPredicted RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 ANKRD54Q6NXT1 300 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 SPATA31D4Q6ZUB0 917 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 PALB2Q86YC2 1186 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 C12orf76Q8N812 135 aaPredicted RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 PIK3R5Q8WYR1 880 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 CCDC47Q96A33 483 aaKnown RBP19.09■□□□□ 0.65
UFM1-204ENST00000464423 CLSTN3Q9BQT9 956 aa19.09■□□□□ 0.65
UFM1-204ENST00000464423 DPP3Q9NY33 737 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms