RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SPATC1LQ9H0A9 340 aa13.53□□□□□ -0.24
NUP58-206ENST00000463407 PPLO60437 1756 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 YY1P25490 414 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 ACADSBP45954 432 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 COPS2P61201 443 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 RBBP7Q16576 425 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 TMCO4Q5TGY1 634 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 RNF135Q8IUD6 432 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.24
NUP58-206ENST00000463407 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.24
NUP58-206ENST00000463407 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 TMCC1O94876 653 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 HERVK_113P62684 666 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 FAM83AQ86UY5 434 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.24
NUP58-206ENST00000463407 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 NAGPAQ9UK23 515 aa13.52□□□□□ -0.24
NUP58-206ENST00000463407 CFAP69A5D8W1 941 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 OPHN1O60890 802 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 CHRNA3P32297 505 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 CLCN3P51790 818 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 PMS2P54278 862 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 KIZQ2M2Z5 673 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 KLHL38Q2WGJ6 581 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 PPHLN1Q8NEY8 458 aaKnown RBP13.52□□□□□ -0.25
NUP58-206ENST00000463407 CPB2Q96IY4 423 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 MCEEQ96PE7 176 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 FBXW4P57775 412 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 SNRPFP62306 86 aaKnown RBP13.52□□□□□ -0.25
NUP58-206ENST00000463407 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 TRIM17Q9Y577 477 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 WNT10BO00744 389 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 CFLARO15519 480 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 KCNN4O15554 427 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 HOXA2O43364 376 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
NUP58-206ENST00000463407 MX2P20592 715 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 AMHR2Q16671 573 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 MMS22LQ6ZRQ5 1243 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 SNF8Q96H20 258 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
NUP58-206ENST00000463407 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP58-206ENST00000463407 SLC37A4O43826 429 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 SLC1A1P43005 524 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 CRLF3Q8IUI8 442 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 NKRFO15226 690 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP58-206ENST00000463407 KPNA6O60684 536 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP58-206ENST00000463407 NOP14P78316 857 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 PDIA2Q13087 525 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 DPF2Q92785 391 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 IL25Q9H293 177 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 CXCL11O14625 94 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 PQBP1O60828 265 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 DSG3P32926 999 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 LBRQ14739 615 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 SHCBP1Q8NEM2 672 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 PABPC5Q96DU9 382 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 PI4K2AQ9BTU6 479 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 ARP10275 920 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 TMPRSS15P98073 1019 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 CDR2Q01850 454 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 CCDC137Q6PK04 289 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 RASA4BC9J798 803 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 RASA4O43374 803 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 ZNF189O75820 626 aaPredicted RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 FAM200BP0CF97 657 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 TSSK1BQ9BXA7 367 aa13.51□□□□□ -0.25
NUP58-206ENST00000463407 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
NUP58-206ENST00000463407 ANP32DO95626 131 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 ARHGEF7Q14155 803 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 DCAF6Q58WW2 860 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 TRIM59Q8IWR1 403 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 FGFR2P21802 821 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 STK4Q13043 487 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 PCNX4Q63HM2 1172 aa13.5□□□□□ -0.25
NUP58-206ENST00000463407 ARHGAP18Q8N392 663 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms