RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 EGR1P18146 543 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 MCCP23508 829 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ANTXR2P58335 489 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 LRP8Q14114 963 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 AGAP9Q5VTM2 703 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 NACC1Q96RE7 527 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PABPC3Q9H361 631 aaKnown RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 MANSC1Q9H8J5 431 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GALNT8Q9NY28 637 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 DKK4Q9UBT3 224 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GIMAP2Q9UG22 337 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 RWDD3Q9Y3V2 267 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ST20-MTHFSA0A0A6YYL1 179 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 PCDH17O14917 1159 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 IL18BPO95998 194 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 TM4SF1P30408 202 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 WNT3AP56704 352 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 RPS16P62249 146 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 BAK1Q16611 211 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 SPECC1Q5M775 1068 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 ZMYM1Q5SVZ6 1142 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 OTUD7BQ6GQQ9 843 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 LRSAM1Q6UWE0 723 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 DTX3Q8N9I9 347 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 UTP4Q969X6 686 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 SEMA6BQ9H3T3 888 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 VAV3Q9UKW4 847 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 SNX13Q9Y5W8 968 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 MTSS1O43312 755 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 FKTNO75072 461 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 NTSR2O95665 410 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 PRKCBP05771 671 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 DBHP09172 617 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 RARBP10826 455 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 GSPT1P15170 499 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 APEX1P27695 318 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 WNT3P56703 355 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 NUCB1Q02818 461 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 EGR3Q06889 387 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 TARBP2Q15633 366 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 C3orf38Q5JPI3 329 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 CCDC30Q5VVM6 783 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 ABHD15Q6UXT9 468 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 TXNRD3Q86VQ6 643 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 LIX1LQ8IVB5 337 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 FTSJ3Q8IY81 847 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 CELF5Q8N6W0 485 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 PPM1NQ8N819 430 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 IGDCC4Q8TDY8 1250 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 STYXQ8WUJ0 223 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 ZNF566Q969W8 418 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 RBM15Q96T37 977 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMC4-203ENST00000462668 INCENPQ9NQS7 918 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 STAP2Q9UGK3 403 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 GPR34Q9UPC5 381 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 PCDHA3Q9Y5H8 950 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 FAM170BA6NMN3 283 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 H3BS24 57 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 DHX15O43143 795 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 SART1O43290 800 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 PCDH8O95206 1070 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 MAPK10P53779 464 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 CREMQ03060 361 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 SP140Q13342 867 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 GRIK4Q16099 956 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 NRSN1Q8IZ57 195 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 ANKRD52Q8NB46 1076 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 IRF7Q92985 503 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 MTFMTQ96DP5 389 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 CHAMP1Q96JM3 812 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 NOP53Q9NZM5 478 aaKnown RBP3.51□□□□□ -1.85
SMC4-203ENST00000462668 PALD1Q9ULE6 856 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 RAXQ9Y2V3 346 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 PCDHA13Q9Y5I0 950 aa3.51□□□□□ -1.85
SMC4-203ENST00000462668 GXYLT2A0PJZ3 443 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 CCP110O43303 1012 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 KITP10721 976 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 ATP1A3P13637 1013 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 CRHR1P34998 444 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 HOXD13P35453 343 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 PRKCQQ04759 706 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 FHL3Q13643 280 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 MAPKAPK3Q16644 382 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 SLC5A9Q2M3M2 681 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 RPUSD3Q6P087 351 aaKnown RBP3.5□□□□□ -1.85
SMC4-203ENST00000462668 INO80CQ6PI98 192 aaPredicted RBP3.5□□□□□ -1.85
SMC4-203ENST00000462668 SLC51AQ86UW1 340 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 ATG16L2Q8NAA4 619 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 USP38Q8NB14 1042 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 PYM1Q9BRP8 204 aaKnown RBP3.5□□□□□ -1.85
SMC4-203ENST00000462668 KIAA1683Q9H0B3 1180 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 SAYSD1Q9NPB0 183 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 MKL2Q9ULH7 1088 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 KDM3AQ9Y4C1 1321 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 KIF21AQ7Z4S6 1674 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 THAP12O43422 761 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 BTF3P20290 206 aaKnown RBP3.5□□□□□ -1.85
SMC4-203ENST00000462668 TAF5Q15542 800 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 PRRT3Q5FWE3 981 aa3.5□□□□□ -1.85
SMC4-203ENST00000462668 RNF43Q68DV7 783 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms