RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ANGPT1Q15389 498 aa19.55■□□□□ 0.72
SSB-206ENST00000461708 FGF14Q92915 247 aa19.55■□□□□ 0.72
SSB-206ENST00000461708 TMX3Q96JJ7 454 aa19.55■□□□□ 0.72
SSB-206ENST00000461708 PNMA5Q96PV4 448 aa19.55■□□□□ 0.72
SSB-206ENST00000461708 CA14Q9ULX7 337 aa19.55■□□□□ 0.72
SSB-206ENST00000461708 STK25O00506 426 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 MAPTP10636 758 aaKnown RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 RFX1P22670 979 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 BRCC3P46736 316 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 PABPC1LQ4VXU2 614 aaKnown RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 VARS2Q5ST30 1063 aaKnown RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 PARM1Q6UWI2 310 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 ASCL5Q7RTU5 278 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 NKD2Q969F2 451 aaPredicted RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 SHDQ96IW2 340 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 AK8Q96MA6 479 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 GDE1Q9NZC3 331 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 LARSQ9P2J5 1176 aaKnown RBP19.54■□□□□ 0.72
SSB-206ENST00000461708 MAFFQ9ULX9 164 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 POLIQ9UNA4 740 aa19.54■□□□□ 0.72
SSB-206ENST00000461708 SFI1A8K8P3 1242 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 H7C4K7 107 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 I3L4J1 428 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 ATF2P15336 505 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 MCM2P49736 904 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 STARD6P59095 220 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 ROR1Q01973 937 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 MCL1Q07820 350 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 NOLC1Q14978 699 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSB-206ENST00000461708 TMEM119Q4V9L6 283 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 FRMD5Q7Z6J6 570 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 NPAS3Q8IXF0 933 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 TCEAL8Q8IYN2 117 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 ITFG1Q8TB96 612 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 RPP25Q9BUL9 199 aaKnown RBP19.53■□□□□ 0.72
SSB-206ENST00000461708 SEMA4AQ9H3S1 761 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 PLEKHA5Q9HAU0 1116 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 DNMT3BQ9UBC3 853 aaKnown RBP19.53■□□□□ 0.72
SSB-206ENST00000461708 SIT1Q9Y3P8 196 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 NUB1Q9Y5A7 615 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 CACNA1IQ9P0X4 2223 aa19.53■□□□□ 0.72
SSB-206ENST00000461708 DMDP11532 3685 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 VWA3AA6NCI4 1184 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 H3BQV1 296 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 MEFVO15553 781 aaPredicted RBP19.52■□□□□ 0.72
SSB-206ENST00000461708 MICAL2O94851 1124 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 PLA2G4BP0C869 781 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 KYAT1Q16773 422 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 SLC10A6Q3KNW5 377 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 TPGS2Q68CL5 300 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 CDK5RAP3Q96JB5 506 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 SUSD3Q96L08 255 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 DLGAP2Q9P1A6 1054 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 ODF2LQ9ULJ1 636 aa19.52■□□□□ 0.72
SSB-206ENST00000461708 CLDN3O15551 220 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 CLTAP09496 248 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 PTPN2P17706 415 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 GJB2P29033 226 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 ELF1P32519 619 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 NCKAP1LP55160 1127 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 GPC5P78333 572 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 PFKPQ01813 784 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 PRKCQQ04759 706 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 ZRSR1Q15695 479 aaKnown RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 APPL2Q8NEU8 664 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 C18orf25Q96B23 403 aaPredicted RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 ZBTB45Q96K62 511 aaPredicted RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 TSPAN18Q96SJ8 248 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 DDX23Q9BUQ8 820 aaKnown RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 HCFC1R1Q9NWW0 138 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 ANKFY1Q9P2R3 1169 aa19.51■□□□□ 0.71
SSB-206ENST00000461708 MRPS23Q9Y3D9 190 aaKnown RBP19.51■□□□□ 0.71
SSB-206ENST00000461708 FRYLO94915 3013 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 F5P12259 2224 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 WDR27A2RRH5 827 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 PRRG1O14668 218 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 ECI2O75521 394 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 LRG1P02750 347 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 RHOP08100 348 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 RAD51AP2Q09MP3 1159 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 ARSHQ5FYA8 562 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 PJA1Q8NG27 643 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 OXCT2Q9BYC2 517 aaPredicted RBP19.5■□□□□ 0.71
SSB-206ENST00000461708 OSBPL6Q9BZF3 934 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 FBXL5Q9UKA1 691 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 OTOGLQ3ZCN5 2332 aa19.5■□□□□ 0.71
SSB-206ENST00000461708 TTC26A0AVF1 554 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 BMP15O95972 392 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 HARSP12081 509 aaKnown RBP19.49■□□□□ 0.71
SSB-206ENST00000461708 CYP3A5P20815 502 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 ZBTB6Q15916 424 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 ZNF280DQ6N043 979 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 HAUS6Q7Z4H7 955 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 TBC1D32Q96NH3 1257 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 UPF2Q9HAU5 1272 aaKnown RBP19.49■□□□□ 0.71
SSB-206ENST00000461708 PCDHB8Q9UN66 801 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 MIA3Q5JRA6 1907 aa19.49■□□□□ 0.71
SSB-206ENST00000461708 FANCMQ8IYD8 2048 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms