RNA–Protein interactions for RNA: ENST00000460061.5

SPOCD1-204, Transcript of SPOC domain containing 1, human

TSL 2

Gene SPOCD1, Length 2,625 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCD1-204	ENST00000460061	ATP2A2	P16615	1042 aa	Known RBP	13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PDE6C	P51160	858 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CCNG1	P51959	295 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	OAZ1	P54368	228 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MCCD1	P59942	119 aa	Predicted RBP	13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SWSAP1	Q6NVH7	229 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SLC47A2	Q86VL8	602 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	FBXL13	Q8NEE6	735 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TMC2	Q8TDI7	906 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MORC4	Q8TE76	937 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SEC14L1	Q92503	715 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SHC3	Q92529	594 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	ALG3	Q92685	438 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	KLHL29	Q96CT2	875 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	KREMEN1	Q96MU8	473 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	RPS6KC1	Q96S38	1066 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TXLNGY	Q9BZA5	131 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	INTS9	Q9NV88	658 aa	Known RBP	13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	RAB20	Q9NX57	234 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CNOT7	Q9UIV1	285 aa	Known RBP	13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	NOCT	Q9UK39	431 aa	Known RBP	13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	STK38L	Q9Y2H1	464 aa		13.38	□□□□□ -0.27
SPOCD1-204	ENST00000460061	DPPA5	A6NC42	116 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	HNRNPDL	O14979	420 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PPFIA2	O75334	1257 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	HSPA6	P17066	643 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GTF2H1	P32780	548 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SSR1	P43307	286 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CTCF	P49711	727 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GMPS	P49915	693 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PAPOLA	P51003	745 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GPC3	P51654	580 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MESD	Q14696	234 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GNPTAB	Q3T906	1256 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SEMA4D	Q92854	862 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	BICD1	Q96G01	975 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	NAF1	Q96HR8	494 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	IFT74	Q96LB3	600 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	WRNIP1	Q96S55	665 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PCDHB18P	Q96TA0	734 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	POP1	Q99575	1024 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	EPB41L4B	Q9H329	900 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	JPH1	Q9HDC5	661 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	COQ4	Q9Y3A0	265 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	NR2E1	Q9Y466	385 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CD2AP	Q9Y5K6	639 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GJA3	Q9Y6H8	435 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SNX3	O60493	162 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	DLAT	P10515	647 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CHRNB2	P17787	502 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MSH2	P43246	934 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	IFI35	P80217	286 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	POU5F1	Q01860	360 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SP4	Q02446	784 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TAF11	Q15544	211 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SLC5A9	Q2M3M2	681 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	BRDT	Q58F21	947 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CWF19L1	Q69YN2	538 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	HOOK3	Q86VS8	718 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MFSD14A	Q96MC6	490 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	FBXL18	Q96ME1	805 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	ZSWIM1	Q9BR11	485 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TRIM31	Q9BZY9	425 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CCDC134	Q9H6E4	229 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	ARHGEF3	Q9NR81	526 aa		13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TLDC2	A0PJX2	215 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	FAM187A	A6NFU0	413 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061		H0YCG3	227 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	ZNF862	O60290	1169 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CYP11B1	P15538	503 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	KCNA2	P16389	499 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PTPRA	P18433	802 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	COMT	P21964	271 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	DSG3	P32926	999 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	IFNAR2	P48551	515 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	HMGCS2	P54868	508 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	BNIP1	Q12981	228 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	DHX34	Q14147	1143 aa	Known RBP	13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	DEFB132	Q7Z7B7	95 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	HELQ	Q8TDG4	1101 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	KCNV2	Q8TDN2	545 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	BSND	Q8WZ55	320 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	PGM2	Q96G03	612 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	WNT8A	Q9H1J5	351 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	IRAK4	Q9NWZ3	460 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	RASAL2	Q9UJF2	1139 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	RTN3	O95197	1032 aa	Predicted RBP	13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	MYBL1	P10243	752 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	ABCD1	P33897	745 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SOX10	P56693	466 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	COPS2	P61201	443 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	FMO1	Q01740	532 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CDR2	Q01850	454 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	CYP24A1	Q07973	514 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SEL1L2	Q5TEA6	688 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	SV2A	Q7L0J3	742 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	GPD1L	Q8N335	351 aa		13.36	□□□□□ -0.27
SPOCD1-204	ENST00000460061	TAS1R2	Q8TE23	839 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms