RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CYP2C9P11712 490 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 METTL23Q86XA0 190 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SH2D3CQ8N5H7 860 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 LEMD2Q8NC56 503 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 U2AF1L4Q8WU68 220 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CCSER1Q9C0I3 900 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ANKHQ9HCJ1 492 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PPARGC1AQ9UBK2 798 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CNOT7Q9UIV1 285 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 XPAP23025 273 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 AKAP5P24588 427 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 IFNGR2P38484 337 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GCKRQ14397 625 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 C20orf194Q5TEA3 1177 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF662Q6ZS27 426 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 STRA8Q7Z7C7 330 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PLAAQ9Y263 795 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RIMS1Q86UR5 1692 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ERBB3P21860 1342 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CSNK2BP67870 215 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PTK6Q13882 451 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PPP2R3CQ969Q6 453 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RIBC2Q9H4K1 309 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 VAT1LQ9HCJ6 419 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TAB2Q9NYJ8 693 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SUFUQ9UMX1 484 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CLUHO75153 1309 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PHF2O75151 1096 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 VPS41P49754 854 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SESN2P58004 480 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 HAND2P61296 217 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RRM2BQ7LG56 351 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MMGT1Q8N4V1 131 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CAVIN3Q969G5 261 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ALPK2Q86TB3 2170 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RGL2O15211 777 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 NPR1P16066 1061 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 AP3S2P59780 193 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PPARAQ07869 468 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CTTNQ14247 550 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TSNQ15631 228 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TTC23LQ6PF05 361 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TLK2Q86UE8 772 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 COL23A1Q86Y22 540 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SLC22A9Q8IVM8 553 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 DCAF4Q8WV16 495 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GCNAQ96QF7 691 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 EHD1Q9H4M9 534 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SYNDIG1Q9H7V2 258 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RXFP1Q9HBX9 757 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 DDX28Q9NUL7 540 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ERVV-1B6SEH8 477 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 PER1O15534 1290 aaPredicted RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 ALBP02768 609 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 PPM1FP49593 454 aaPredicted RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SPIDRQ14159 915 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 RCOR2Q8IZ40 523 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 AMER2Q8N7J2 671 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 UBAP1Q9NZ09 502 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM13O60858 407 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 CLPTM1O96005 669 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 GZMAP12544 262 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 WARSP23381 471 aaKnown RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 HNMTP50135 292 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 CDK16Q00536 496 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 MAPRE1Q15691 268 aaKnown RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC36Q1X8D7 754 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 CCDC157Q569K6 752 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TJAP1Q5JTD0 557 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 RABGAP1LQ5R372 815 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SNAP47Q5SQN1 464 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TMTC4Q5T4D3 741 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM67Q6ZTA4 783 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SIX6OS1Q8N1H7 587 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 ANKRD42Q8N9B4 389 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 RDM1Q8NG50 284 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 GANQ9H2C0 597 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 ARHGEF28Q8N1W1 1705 aaKnown RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 A0A0A6YYK5 440 aaPredicted RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 METTL21EPA6NDL7 271 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 PDXKO00764 312 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 IL6P05231 212 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TSHRP16473 764 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 PLTPP55058 493 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SNX30Q5VWJ9 437 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 OTUD7BQ6GQQ9 843 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 BNIPLQ7Z465 357 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SGMS1Q86VZ5 419 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC6Q86X45 466 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 PNMA1Q8ND90 353 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 WDR36Q8NI36 951 aaKnown RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 ARL8AQ96BM9 186 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEB18Q96M61 343 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 STK33Q9BYT3 514 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 RRAGDQ9NQL2 400 aaPredicted RBP5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SEC14L4Q9UDX3 406 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 SNX12Q9UMY4 172 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 NOD1Q9Y239 953 aa5.46□□□□□ -1.53
CSMD3-204ENST00000455883 TBX22Q9Y458 520 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms