RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TFAP2BQ92481 460 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 RPL36ALQ969Q0 106 aaKnown RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 MARS2Q96GW9 593 aaKnown RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 FBXL20Q96IG2 436 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 MED15Q96RN5 788 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 PNKPQ96T60 521 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 UHRF1Q96T88 793 aaPredicted RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 ADGRE3Q9BY15 652 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 FBXO34Q9NWN3 711 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 HSFX1Q9UBD0 423 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 CDK11AQ9UQ88 783 aaPredicted RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF521Q96K83 1311 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 PROM1O43490 865 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 ASMTLO95671 621 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 KELP23276 732 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 CCKBRP32239 447 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 SREBF1P36956 1147 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 ALDH1A3P47895 512 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 LSSP48449 732 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 CCT4P50991 539 aaKnown RBP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 KLF9Q13886 244 aaPredicted RBP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 ETFDHQ16134 617 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 C21orf62-AS1Q17RA5 79 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 CT83Q5H943 113 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 GJC2Q5T442 439 aaPredicted RBP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 OTUD7BQ6GQQ9 843 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF517Q6ZMY9 492 aaPredicted RBP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 C11orf74Q86VG3 221 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 SEMA6DQ8NFY4 1073 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 RGMAQ96B86 450 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 WACQ9BTA9 647 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 ADAM21Q9UKJ8 722 aa3.18□□□□□ -1.9
LINC02540-201ENST00000455554 NOC2LQ9Y3T9 749 aaKnown RBP3.18□□□□□ -1.9
LINC02540-201ENST00000455554 GSG1L2A8MUP6 293 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 GUCY1A2P33402 732 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 PER3P56645 1201 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 BROXQ5VW32 411 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 FAM180AQ6UWF9 173 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 PQLC1Q8N2U9 271 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 Q8NA96 180 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 SH3TC2Q8TF17 1288 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 NUP133Q8WUM0 1156 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 STON2Q8WXE9 905 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 DNAJC2Q99543 621 aaKnown RBP3.17□□□□□ -1.9
LINC02540-201ENST00000455554 SEMA4CQ9C0C4 833 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 SENP6Q9GZR1 1112 aaPredicted RBP3.17□□□□□ -1.9
LINC02540-201ENST00000455554 OSBPL2Q9H1P3 480 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 BHMT2Q9H2M3 363 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 NRIP3Q9NQ35 241 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 LANCL2Q9NS86 450 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 SLC23A1Q9UHI7 598 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 DPP7Q9UHL4 492 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 EDARQ9UNE0 448 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 BTBD3Q9Y2F9 522 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 TBC1D30Q9Y2I9 924 aa3.17□□□□□ -1.9
LINC02540-201ENST00000455554 CACNA1IQ9P0X4 2223 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 LINC00473A8K010 186 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 MOSPD3O75425 235 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 NTN1O95631 604 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 ALAS1P13196 640 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 ADCYAP1R1P41586 468 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 FOXG1P55316 489 aaPredicted RBP3.16□□□□□ -1.9
LINC02540-201ENST00000455554 IL2P60568 153 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 NOMO3P69849 1222 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 CDK17Q00537 523 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 TFF2Q03403 129 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 NOMO1Q15155 1222 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 PTPRRQ15256 657 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 PCBP1Q15365 356 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC02540-201ENST00000455554 UGT8Q16880 541 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 FAM153CQ494X1 144 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 NOMO2Q5JPE7 1267 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 MORN5Q5VZ52 161 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 RUSC1-AS1Q66K80 236 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 SLC9A4Q6AI14 798 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.16□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF782Q6ZMW2 699 aaPredicted RBP3.16□□□□□ -1.9
LINC02540-201ENST00000455554 SEM1Q6ZVN7 128 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 UBE3BQ7Z3V4 1068 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 TECPR1Q7Z6L1 1165 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 LRRTM3Q86VH5 581 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 RASSF3Q86WH2 238 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 FITM2Q8N6M3 262 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 TOR1AIP2Q8NFQ8 470 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 SLC5A5Q92911 643 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 TMEM125Q96AQ2 219 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 EAF2Q96CJ1 260 aaPredicted RBP3.16□□□□□ -1.9
LINC02540-201ENST00000455554 HAPLN3Q96S86 360 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 INTS13Q9NVM9 706 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 USP35Q9P2H5 1018 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF580Q9UK33 172 aa3.16□□□□□ -1.9
LINC02540-201ENST00000455554 A0A1W2PS29 197 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 ADM5C9JUS6 153 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 GCOM1H8Y6P7 765 aaPredicted RBP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 TEX33O43247 280 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 FKBP9O95302 570 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 CHRM2P08172 466 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 FPR1P21462 350 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms