RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PWWP2AQ96N64 755 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 PRRX2Q99811 253 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 MTG1Q9BT17 334 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 UPF3BQ9BZI7 483 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 ACAD9Q9H845 621 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 ARMT1Q9H993 441 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 VTA1Q9NP79 307 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 LUC7LQ9NQ29 371 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 FAM86C1Q9NVL1 165 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 CYP39A1Q9NYL5 469 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 FEM1BQ9UK73 627 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 TNNQ9UQP3 1299 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 ZNF451Q9Y4E5 1061 aa4.38□□□□□ -1.71
RBM39-220ENST00000455343 DDX49Q9Y6V7 483 aaKnown RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 ZFHX2Q9C0A1 2572 aaPredicted RBP4.38□□□□□ -1.71
RBM39-220ENST00000455343 FOCADQ5VW36 1801 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 DNAH14Q0VDD8 3507 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 ZNF318Q5VUA4 2279 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 PROB1E7EW31 1015 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 H3BNC9 293 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 CBFA2T2O43439 604 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 KPNA6O60684 536 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 PLA2G6O60733 806 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 NBNO60934 754 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 EFCAB14O75071 495 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 BCAR3O75815 825 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 MBD4O95243 580 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 PARNO95453 639 aaKnown RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 TP53P04637 393 aaPredicted RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 CYBBP04839 570 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 ITGA4P13612 1032 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 IFNGR1P15260 489 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 ADD2P35612 726 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 NOP2P46087 812 aaKnown RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 KCNJ6P48051 423 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 LIMS1P48059 325 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 CPT1AP50416 773 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 CORO7P57737 925 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 OS9Q13438 667 aaPredicted RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 TKFCQ3LXA3 575 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 SBK1Q52WX2 424 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 FBXW10Q5XX13 1052 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 PAQR3Q6TCH7 311 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 EEPD1Q7L9B9 569 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 TP53I13Q8NBR0 393 aaPredicted RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 GMCL1P1Q8NEA9 526 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 AFAP1L1Q8TED9 768 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 EDAQ92838 391 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 PTCHD1Q96NR3 888 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 FCRL3Q96P31 734 aaPredicted RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.711e-8■□□□□ 10.4
RBM39-220ENST00000455343 NOL6Q9H6R4 1146 aaKnown RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 RNF146Q9NTX7 359 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 CTNNA3Q9UI47 895 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 MTUS1Q9ULD2 1270 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 SF3B6Q9Y3B4 125 aaKnown RBP4.37□□□□□ -1.71
RBM39-220ENST00000455343 INSL6Q9Y581 213 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 VPS13AQ96RL7 3174 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 BRWD1Q9NSI6 2320 aa4.37□□□□□ -1.71
RBM39-220ENST00000455343 GOLIM4O00461 696 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 NKRFO15226 690 aaKnown RBP eCLIP4.36□□□□□ -1.71
RBM39-220ENST00000455343 IPO8O15397 1037 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 ANP32CO43423 234 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 MBTPS2O43462 519 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 NCK2O43639 380 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 CHGBP05060 677 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 CD3EP07766 207 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 LINC00271P0C7V0 271 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 PFKLP17858 780 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 EDNRBP24530 442 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 TACR1P25103 407 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 RACK1P63244 317 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 DLX2Q07687 328 aaPredicted RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 PTPROQ16827 1216 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 TRIM71Q2Q1W2 868 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 EPC2Q52LR7 807 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 TCEAL5Q5H9L2 206 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 MUM1L1Q5H9M0 696 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 BICRALQ6AI39 1079 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 GIMAP6Q6P9H5 292 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 AACSQ86V21 672 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 LRRC47Q8N1G4 583 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 TMEM57Q8N5G2 664 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 KAT2BQ92831 832 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 RNF34Q969K3 372 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 SAMD11Q96NU1 681 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 WDR11Q9BZH6 1224 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 PUS7LQ9H0K6 701 aaKnown RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 HOMER2Q9NSB8 354 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 ARPP21Q9UBL0 812 aaPredicted RBP4.36□□□□□ -1.71
RBM39-220ENST00000455343 CLIP2Q9UDT6 1046 aa4.36□□□□□ -1.71
RBM39-220ENST00000455343 MUTYHQ9UIF7 546 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms