RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 NPHP3-ACAD11A0A0J9YXS1 232 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 H3BQV1 296 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 PLS3P13797 630 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 ROR1Q01973 937 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 STRN3Q13033 797 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 PABPC1LQ4VXU2 614 aaKnown RBP30.94■■■□□ 2.54
CBX4-202ENST00000448310 SPECC1Q5M775 1068 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 SYT2Q8N9I0 419 aaPredicted RBP30.94■■■□□ 2.54
CBX4-202ENST00000448310 TMEM161BQ8NDZ6 487 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 SPIRE2Q8WWL2 714 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 ING5Q8WYH8 240 aa30.94■■■□□ 2.54
CBX4-202ENST00000448310 DCNP07585 359 aaKnown RBP30.93■■■□□ 2.54
CBX4-202ENST00000448310 POU2F2P09086 479 aa30.93■■■□□ 2.54
CBX4-202ENST00000448310 SLC12A3P55017 1021 aa30.93■■■□□ 2.54
CBX4-202ENST00000448310 ARPP19P56211 112 aa30.93■■■□□ 2.54
CBX4-202ENST00000448310 NUB1Q9Y5A7 615 aa30.93■■■□□ 2.54
CBX4-202ENST00000448310 MIA3Q5JRA6 1907 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 WDR27A2RRH5 827 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 TOM1L1O75674 476 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 PLA2G4BP0C869 781 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 MAPTP10636 758 aaKnown RBP30.92■■■□□ 2.54
CBX4-202ENST00000448310 NOLC1Q14978 699 aaKnown RBP eCLIP30.92■■■□□ 2.54
CBX4-202ENST00000448310 SLC8B1Q6J4K2 584 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 MTSS1LQ765P7 747 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 NPAS3Q8IXF0 933 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 TMEM130Q8N3G9 435 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 NKD2Q969F2 451 aaPredicted RBP30.92■■■□□ 2.54
CBX4-202ENST00000448310 CDK5RAP3Q96JB5 506 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 KXD1Q9BQD3 176 aa30.92■■■□□ 2.54
CBX4-202ENST00000448310 SMTNP53814 917 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 SLC10A6Q3KNW5 377 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 TMEM119Q4V9L6 283 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 PHLDB3Q6NSJ2 640 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 ZNF461Q8TAF7 563 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 FOXQ1Q9C009 403 aa30.91■■■□□ 2.54
CBX4-202ENST00000448310 RPL9P32969 192 aaKnown RBP30.9■■■□□ 2.54
CBX4-202ENST00000448310 SLC5A9Q2M3M2 681 aa30.9■■■□□ 2.54
CBX4-202ENST00000448310 TUBGCP4Q9UGJ1 667 aa30.9■■■□□ 2.54
CBX4-202ENST00000448310 KCNH3Q9ULD8 1083 aa30.9■■■□□ 2.54
CBX4-202ENST00000448310 MRPS23Q9Y3D9 190 aaKnown RBP30.9■■■□□ 2.54
CBX4-202ENST00000448310 SIT1Q9Y3P8 196 aa30.9■■■□□ 2.54
CBX4-202ENST00000448310 SYN3O14994 580 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 TBC1D4O60343 1298 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 ABLIM3O94929 683 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 RHOP08100 348 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 MATR3P43243 847 aaKnown RBP eCLIP30.89■■■□□ 2.54
CBX4-202ENST00000448310 SPAG1Q07617 926 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 ARSHQ5FYA8 562 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 RTL10Q7L3V2 364 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 HAPLN2Q9GZV7 340 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 FBXL5Q9UKA1 691 aa30.89■■■□□ 2.54
CBX4-202ENST00000448310 PRRG1O14668 218 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 LRG1P02750 347 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 CXCL8P10145 99 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 ELF1P32519 619 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 MCM4P33991 863 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 SNW1Q13573 536 aaKnown RBP30.88■■■□□ 2.53
CBX4-202ENST00000448310 ARL6IP4Q66PJ3 421 aaKnown RBP30.88■■■□□ 2.53
CBX4-202ENST00000448310 ZPBP2Q6X784 338 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 MCRS1Q96EZ8 462 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 CYP4F11Q9HBI6 524 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 DLGAP2Q9P1A6 1054 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 KCNG1Q9UIX4 513 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 SPTBN4Q9H254 2564 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 CACNA1IQ9P0X4 2223 aa30.88■■■□□ 2.53
CBX4-202ENST00000448310 ARHGEF37A1IGU5 675 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 H7C4K7 107 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 CLDN3O15551 220 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 LRRN2O75325 713 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 SEC24AO95486 1093 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 CENPBP07199 599 aaPredicted RBP30.87■■■□□ 2.53
CBX4-202ENST00000448310 MCL1Q07820 350 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 MRPL58Q14197 206 aaKnown RBP30.87■■■□□ 2.53
CBX4-202ENST00000448310 CTXN3Q4LDR2 81 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 POTEHQ6S545 545 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 KCTD17Q8N5Z5 321 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 LRRC15Q8TF66 581 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 SUSD3Q96L08 255 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 TBC1D32Q96NH3 1257 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 KCND2Q9NZV8 630 aa30.87■■■□□ 2.53
CBX4-202ENST00000448310 GLULP15104 373 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 CEBPBP17676 345 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 STARD6P59095 220 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 DHX8Q14562 1220 aaKnown RBP30.86■■■□□ 2.53
CBX4-202ENST00000448310 PJA1Q8NG27 643 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 BICD1Q96G01 975 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 SMC3Q9UQE7 1217 aa30.86■■■□□ 2.53
CBX4-202ENST00000448310 ATF2P15336 505 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 NCKAP1LP55160 1127 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 HAUS6Q7Z4H7 955 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 DDX12PQ92771 950 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 CORO1BQ9BR76 489 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 REEP2Q9BRK0 252 aa30.85■■■□□ 2.53
CBX4-202ENST00000448310 LARSQ9P2J5 1176 aaKnown RBP30.85■■■□□ 2.53
CBX4-202ENST00000448310 PTPN2P17706 415 aa30.84■■■□□ 2.53
CBX4-202ENST00000448310 TNFSF9P41273 254 aa30.84■■■□□ 2.53
CBX4-202ENST00000448310 MLF2Q15773 248 aaPredicted RBP30.84■■■□□ 2.53
CBX4-202ENST00000448310 GPBP1Q86WP2 473 aa30.84■■■□□ 2.53
CBX4-202ENST00000448310 TCEAL8Q8IYN2 117 aa30.84■■■□□ 2.53
CBX4-202ENST00000448310 SHDQ96IW2 340 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms