RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 KRT13P13646 458 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 ETS2P15036 469 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 VCAM1P19320 739 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 CALCOCO2Q13137 446 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 CERKLQ49MI3 558 aaPredicted RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 SYDE2Q5VT97 1194 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 IZUMO2Q6UXV1 221 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 EPM2AIP1Q7L775 607 aaPredicted RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 CCDC65Q8IXS2 484 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PDCD7Q8N8D1 485 aaKnown RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PTCD3Q96EY7 689 aaKnown RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 MLXIPLQ9NP71 852 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 EMILIN3Q9NT22 766 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 STK24Q9Y6E0 443 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 KLRF2D3W0D1 207 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 GYG2O15488 501 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PRPF4O43172 522 aaKnown RBP eCLIP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 EXOC3O60645 756 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 TTC4O95801 387 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 TMEM253P0C7T8 217 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PORP16435 677 aaPredicted RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 MLH1P40692 756 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 NEK3P51956 506 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 ORC2Q13416 577 aaPredicted RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 HSP90AA5PQ58FG0 334 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 UBAP2Q5T6F2 1119 aaKnown RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 OLFML2BQ68BL8 750 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 SCUBE1Q8IWY4 988 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 SLF2Q8IX21 1173 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 NSL1Q96IY1 281 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 COA1Q9GZY4 146 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 METTL5Q9NRN9 209 aaKnown RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 TUBA8Q9NY65 449 aaPredicted RBP20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PCDHA6Q9UN73 950 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 PCDHA8Q9Y5H6 950 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 FOCADQ5VW36 1801 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 FRMPD4Q14CM0 1322 aa20.36■□□□□ 0.85
HMGA1-205ENST00000447654 A6NJR5 290 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PLCG2P16885 1265 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 TXKP42681 527 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PRPF4BQ13523 1007 aaKnown RBP20.35■□□□□ 0.85
HMGA1-205ENST00000447654 KRT72Q14CN4 511 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 FYB2Q5VWT5 728 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 CC2D2BQ6DHV5 1058 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 DUS1LQ6P1R4 473 aaKnown RBP20.35■□□□□ 0.85
HMGA1-205ENST00000447654 RINLQ6ZS11 566 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 NLRP9Q7RTR0 991 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 CCDC77Q9BR77 488 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PRDM16Q9HAZ2 1276 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 BIN2Q9UBW5 565 aaPredicted RBP20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PCDHAC2Q9Y5I4 1007 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 MAGEC1O60732 1142 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 GAS8O95995 478 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 NPR1P16066 1061 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 WDR4P57081 412 aaKnown RBP20.35■□□□□ 0.85
HMGA1-205ENST00000447654 C3orf62Q6ZUJ4 267 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 CROCCP3Q8IVE0 287 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 MYOCDQ8IZQ8 938 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 VPS52Q8N1B4 723 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PRELID2Q8N945 189 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 DYDC2Q96IM9 177 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 ZC3H12CQ9C0D7 883 aaKnown RBP20.35■□□□□ 0.85
HMGA1-205ENST00000447654 BHMT2Q9H2M3 363 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 GPAMQ9HCL2 828 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 FAIMQ9NVQ4 179 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 BARHL2Q9NY43 387 aa20.35■□□□□ 0.85
HMGA1-205ENST00000447654 PLSCR1O15162 318 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 OR52Z1P0C646 297 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 VARSP26640 1264 aaKnown RBP20.34■□□□□ 0.85
HMGA1-205ENST00000447654 CAV1Q03135 178 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 GABPAQ06546 454 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 KYNUQ16719 465 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 ZC3H3Q8IXZ2 948 aaKnown RBP20.34■□□□□ 0.85
HMGA1-205ENST00000447654 NUP93Q8N1F7 819 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 SMG5Q9UPR3 1016 aaKnown RBP20.34■□□□□ 0.85
HMGA1-205ENST00000447654 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 USP17L5A8MUK1 530 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 DNAJC6O75061 913 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 SUPT3HO75486 399 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 ANPEPP15144 967 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 NOVP48745 357 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 AP2B1P63010 937 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 GSTM4Q03013 218 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 STAT4Q14765 748 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 FAM91A1Q658Y4 838 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
HMGA1-205ENST00000447654 DENND1AQ8TEH3 1009 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 SLCO2A1Q92959 643 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 C18orf8Q96DM3 657 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 NDE1Q9NXR1 346 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 SENP1Q9P0U3 644 aa20.34■□□□□ 0.85
HMGA1-205ENST00000447654 NDC80O14777 642 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 AKR1B1P15121 316 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 HADHBP55084 474 aaKnown RBP20.33■□□□□ 0.85
HMGA1-205ENST00000447654 EIF6P56537 245 aaKnown RBP20.33■□□□□ 0.85
HMGA1-205ENST00000447654 PDE1BQ01064 536 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 ASPHQ12797 758 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 INF2Q27J81 1249 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms