RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 GUCY1A2P33402 732 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 GSK3AP49840 483 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 ITGA1P56199 1179 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 BEND5Q7L4P6 421 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 TRMT2AQ8IZ69 625 aaKnown RBP7.48□□□□□ -1.21
COL11A1-205ENST00000447608 TRIM43Q96BQ3 446 aaPredicted RBP7.48□□□□□ -1.21
COL11A1-205ENST00000447608 CLIC6Q96NY7 704 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 DPH1Q9BZG8 443 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 SLAMF7Q9NQ25 335 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 SERHLQ9NQF3 203 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 TMEM140Q9NV12 185 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 SPATA6Q9NWH7 488 aaPredicted RBP7.48□□□□□ -1.21
COL11A1-205ENST00000447608 ING3Q9NXR8 418 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 SRRDQ9UH36 339 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 FBXO10Q9UK96 956 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 CROTQ9UKG9 612 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 RUVBL1Q9Y265 456 aaKnown RBP7.48□□□□□ -1.21
COL11A1-205ENST00000447608 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 RPS6KL1Q9Y6S9 549 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 CFTRP13569 1480 aa7.48□□□□□ -1.21
COL11A1-205ENST00000447608 EIF3FO00303 357 aaPredicted RBP7.47□□□□□ -1.21
COL11A1-205ENST00000447608 ACKR2O00590 384 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 ITGA10O75578 1167 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 KNG1P01042 644 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 MT-ND5P03915 603 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 SPINK2P20155 84 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 CRHR1P34998 444 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 CASP2P42575 452 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 PHKA1P46020 1223 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 KCNJ5P48544 419 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 PIK3CGP48736 1102 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 KCNQ1P51787 676 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 ARL4CP56559 192 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 SLC13A2Q13183 592 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 FYB2Q5VWT5 728 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 JMJD6Q6NYC1 403 aaPredicted RBP7.47□□□□□ -1.21
COL11A1-205ENST00000447608 ZNF783Q6ZMS7 281 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 TP53INP2Q8IXH6 220 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 NAXEQ8NCW5 288 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 SMARCC2Q8TAQ2 1214 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 PPM1MQ96MI6 270 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 SLC6A17Q9H1V8 727 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 PDP2Q9P2J9 529 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 GJD2Q9UKL4 321 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 MED16Q9Y2X0 877 aa7.47□□□□□ -1.21
COL11A1-205ENST00000447608 EYA2O00167 538 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 TRIM38O00635 465 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 HNRNPDLO14979 420 aaKnown RBP7.46□□□□□ -1.22
COL11A1-205ENST00000447608 THAP12O43422 761 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 KLHL18O94889 574 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 MATN4O95460 622 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 CNOT4O95628 575 aaKnown RBP7.46□□□□□ -1.22
COL11A1-205ENST00000447608 MYL4P12829 197 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 SSTR4P31391 388 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 VIPR1P32241 457 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 PTPN7P35236 360 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 SERPINF1P36955 418 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 AFMP43652 599 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 KCNMA1Q12791 1236 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 SPARCL1Q14515 664 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 EIF4HQ15056 248 aaKnown RBP7.46□□□□□ -1.22
COL11A1-205ENST00000447608 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 RRAGBQ5VZM2 374 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 CLEC14AQ86T13 490 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 MICU3Q86XE3 530 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 FANCBQ8NB91 859 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 ZSCAN31Q96LW9 406 aaPredicted RBP7.46□□□□□ -1.22
COL11A1-205ENST00000447608 GORASP1Q9BQQ3 440 aa7.46□□□□□ -1.22
COL11A1-205ENST00000447608 RSF1Q96T23 1441 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-205ENST00000447608 AQP12BA6NM10 295 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 SYT5O00445 386 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 ABHD16AO95870 558 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 GASTP01350 101 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 PROCP04070 461 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 SBK3P0C264 359 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 ATF2P15336 505 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 NCKAP1LP55160 1127 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 WNT3AP56704 352 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 SESN2P58004 480 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-205ENST00000447608 FOXO1Q12778 655 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 G3BP1Q13283 466 aaKnown RBP eCLIP7.45□□□□□ -1.22
COL11A1-205ENST00000447608 CTBP1Q13363 440 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 TAF12Q16514 161 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 CATSPERGQ6ZRH7 1159 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 RFX8Q6ZV50 586 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 UNC13DQ70J99 1090 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 RNF44Q7L0R7 432 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 PCSK9Q8NBP7 692 aaKnown RBP7.45□□□□□ -1.22
COL11A1-205ENST00000447608 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 SIDT1Q9NXL6 827 aaKnown RBP7.45□□□□□ -1.22
COL11A1-205ENST00000447608 CRYL1Q9Y2S2 319 aa7.45□□□□□ -1.22
COL11A1-205ENST00000447608 PRSS29PA6NIE9 313 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 PODXLO00592 558 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 GDF11O95390 407 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 NDST3O95803 873 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 NOMO3P69849 1222 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 ADAM15Q13444 863 aa7.44□□□□□ -1.22
COL11A1-205ENST00000447608 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
COL11A1-205ENST00000447608 PRAMEF14Q5SWL7 426 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms