RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 MAN1A1P33908 653 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RFC5P40937 340 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RGS2P41220 211 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CLCN2P51788 898 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ADCY7P51828 1080 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PMS2P54278 862 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RAPGEF1Q13905 1077 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 QRICH1Q2TAL8 776 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 WDR78Q5VTH9 848 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 KRT79Q5XKE5 535 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ALKBH5Q6P6C2 394 aaKnown RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 C17orf99Q6UX52 265 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ASRGL1Q7L266 308 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 HEATR3Q7Z4Q2 680 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 IRF2BP2Q7Z5L9 587 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PLEKHH3Q7Z736 793 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 NCAPG2Q86XI2 1143 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CPXCR1Q8N123 301 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RIBC1Q8N443 379 aaPredicted RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 KIAA0895Q8NCT3 520 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 FBF1Q8TES7 1133 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 MAIP1Q8WWC4 291 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 LARP4BQ92615 738 aaKnown RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 SLCO2A1Q92959 643 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ATG4CQ96DT6 458 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 SPDL1Q96EA4 605 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 MS4A14Q96JA4 679 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CDK5RAP3Q96JB5 506 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RPS6KC1Q96S38 1066 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 MMP19Q99542 508 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PTPN18Q99952 460 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 FAM192AQ9GZU8 254 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PSTPIP2Q9H939 334 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 VAT1LQ9HCJ6 419 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RNF146Q9NTX7 359 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ETAA1Q9NY74 926 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 EHD2Q9NZN4 543 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 NAGPAQ9UK23 515 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ZNFX1Q9P2E3 1918 aaKnown RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 LRRD1A4D1F6 860 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 J3QL48 77 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 GPR25O00155 361 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TRAFD1O14545 582 aaPredicted RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 SLC16A3O15427 465 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 MAGEB2O15479 319 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 NCK2O43639 380 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 CYP2C8P10632 490 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 PAX7P23759 505 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ALDH3A1P30838 453 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 SLC16A2P36021 539 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 GHRHRQ02643 423 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TMEM132BQ14DG7 1078 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 SHROOM1Q2M3G4 852 aaPredicted RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TMEM119Q4V9L6 283 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 KIAA1755Q5JYT7 1200 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 SLC30A9Q6PML9 568 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 PPP1R21Q6ZMI0 780 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 RNF207Q6ZRF8 634 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 DPP9Q86TI2 863 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 RHOT2Q8IXI1 618 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 METTL13Q8N6R0 699 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ENDOVQ8N8Q3 282 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 BBOF1Q8ND07 529 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ZNF398Q8TD17 642 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 RAD54LQ92698 747 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 KLHL29Q96CT2 875 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 CDHR1Q96JP9 859 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TRAPPC9Q96Q05 1148 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 PIGSQ96S52 555 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 IWS1Q96ST2 819 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 CCDC77Q9BR77 488 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 UBA5Q9GZZ9 404 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 GANQ9H2C0 597 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 UBN1Q9NPG3 1134 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ZDHHC18Q9NUE0 388 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 KLHL14Q9P2G3 628 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 LARSQ9P2J5 1176 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 CNOT8Q9UFF9 292 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TCEAL9Q9UHQ7 104 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 ZNF214Q9UL59 606 aaPredicted RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 TRAF3IP3Q9Y228 551 aa8.12□□□□□ -1.11
TRIM4-204ENST00000447480 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
TRIM4-204ENST00000447480 PLXNA1Q9UIW2 1896 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 NCANO14594 1321 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 ZNF536O15090 1300 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 ADGRA2Q96PE1 1338 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 A0A087X0T9 212 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 SMCO2A6NFE2 343 aa8.11□□□□□ -1.11
TRIM4-204ENST00000447480 PDXKO00764 312 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms