RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 STK11IPQ8N1F8 1099 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 AGGF1Q8N302 714 aaeCLIP3.78□□□□□ -1.8
PMS1-215ENST00000447232 MDM1Q8TC05 714 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 BCL7CQ8WUZ0 217 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 GAB3Q8WWW8 586 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 IGSF21Q96ID5 467 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CELF4Q9BZC1 486 aaKnown RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 ZMYND15Q9H091 742 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 SEPT3Q9UH03 358 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CDH7Q9ULB5 785 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TELO2Q9Y4R8 837 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TSC2P49815 1807 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 DENND3A2RUS2 1198 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 GSG1L2A8MUP6 293 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CHGBP05060 677 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TSPY3P0CV98 308 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TSPY8P0CW00 308 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 KLRC2P26717 231 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 HOXC13P31276 330 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ALDH7A1P49419 539 aaKnown RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 RIPPLY3P57055 190 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CFHR1Q03591 330 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 PPFIA1Q13136 1202 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CLLU1OSQ5K130 101 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ARHGEF16Q5VV41 709 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CEP135Q66GS9 1140 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 HEATR6Q6AI08 1181 aaKnown RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 METTL7BQ6UX53 244 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 PIP4P1Q86T03 277 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 VSIG10LQ86VR7 867 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CEP120Q8N960 986 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TMEM40Q8WWA1 233 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ZBTB10Q96DT7 871 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 SPACA7Q96KW9 195 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 PDCD2LQ9BRP1 358 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 EMILIN2Q9BXX0 1053 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 LACRTQ9GZZ8 138 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 NT5C3AQ9H0P0 336 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 RASSF4Q9H2L5 321 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ADAMTS10Q9H324 1103 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 PRORYQ9H606 182 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 LMAN1LQ9HAT1 526 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ZNF287Q9HBT7 754 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TMEM9BQ9NQ34 198 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 IL17RBQ9NRM6 502 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 ABI2Q9NYB9 513 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 NDRG2Q9UN36 371 aaKnown RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 COL5A1P20908 1838 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 NUP205Q92621 2012 aa3.78□□□□□ -1.81
PMS1-215ENST00000447232 CREBBPQ92793 2442 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 CCDC163A0A0D9SF12 145 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 UPK3BL1B0FP48 263 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 UPK3BL2E5RIL1 263 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 PYCARD-AS1I3L0S3 204 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 GOLIM4O00461 696 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 NOP56O00567 594 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 MAN2B1O00754 1011 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 AKAP3O75969 853 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 SCNN1AP37088 669 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 SIM1P81133 766 aaPredicted RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 TFAP4Q01664 338 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 GHRHRQ02643 423 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 TMEM62Q0P6H9 643 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 UBE3CQ15386 1083 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 CCDC96Q2M329 555 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 COLEC12Q5KU26 742 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 TXNDC11Q6PKC3 985 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 ATCAYQ86WG3 371 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 HDAC7Q8WUI4 952 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 DNASE1L2Q92874 299 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 PHKBQ93100 1093 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 PHF20Q9BVI0 1012 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 FAM49AQ9H0Q0 323 aaPredicted RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 C2orf42Q9NWW7 574 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 DPP7Q9UHL4 492 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 SRPK3Q9UPE1 567 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 NOP58Q9Y2X3 529 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 NOC2LQ9Y3T9 749 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 ATG2BQ96BY7 2078 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 BCLAF3A2AJT9 711 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 ENO4A6NNW6 628 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 MINDY4BA8MYZ0 360 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 M0QZ92 97 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 RPP40O75818 363 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 SMNDC1O75940 238 aaKnown RBP eCLIP3.77□□□□□ -1.81
PMS1-215ENST00000447232 C1RP00736 705 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 HSPD1P10809 573 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 ZNF423Q2M1K9 1284 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 USH1GQ495M9 461 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 PLK5Q496M5 336 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 ZNF280BQ86YH2 543 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 IL31RAQ8NI17 732 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 SSH3Q8TE77 659 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 FGF13Q92913 245 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 STRBPQ96SI9 672 aaKnown RBP3.77□□□□□ -1.81
PMS1-215ENST00000447232 KXD1Q9BQD3 176 aa3.77□□□□□ -1.81
PMS1-215ENST00000447232 PUS7LQ9H0K6 701 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms