RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ATG16L1Q676U5 607 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 JDP2Q8WYK2 163 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ATG4AQ8WYN0 398 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 RBM17Q96I25 401 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 TRIM56Q9BRZ2 755 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 ESRRBO95718 433 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 AMPD1P23109 780 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CHKAP35790 457 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CENPCQ03188 943 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TRPC3Q13507 836 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ATP11CQ8NB49 1132 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ALKBH8Q96BT7 664 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 PICK1Q9NRD5 415 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 BLOC1S4Q9NUP1 217 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TRIM43BA6NCK2 446 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 DKC1O60832 514 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC1-201ENST00000443617 PRKCIP41743 596 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 RAP1GDS1P52306 607 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 SLC18A1P54219 525 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 KIF22Q14807 665 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 AADACL2Q6P093 401 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 LRP10Q7Z4F1 713 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TMPRSS6Q8IU80 811 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 DTNAQ9Y4J8 743 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TCRBV7S2A1N4TA0A589 114 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 MARCKSL1P49006 195 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 GRIP2Q9C0E4 1043 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CCDC68Q9H2F9 335 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ADCY3O60266 1144 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 EDF1O60869 148 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 RNASEH1O60930 286 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 KLHL2O95198 593 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 YWHAGP61981 247 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC1-201ENST00000443617 DRC3Q9H069 523 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 KIAA1586Q9HCI6 787 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 NIP7Q9Y221 180 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC1-201ENST00000443617 MEIS1O00470 390 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 EPHB1P54762 984 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 DDB1Q16531 1140 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 GALNT4Q8N4A0 578 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 LRRC15Q8TF66 581 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PNMA5Q96PV4 448 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 KCNK4Q9NYG8 393 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 SNAP23O00161 211 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ATMINO43313 823 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 MAGEC1O60732 1142 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 HDAC4P56524 1084 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TBL3Q12788 808 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 WDR44Q5JSH3 913 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 LRRC8BQ6P9F7 803 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DHDDSQ86SQ9 333 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 LRRC19Q9H756 370 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 JAG2Q9Y219 1238 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 NID2Q14112 1375 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 IPO5O00410 1097 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 RAG1P15918 1043 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 WDR78Q5VTH9 848 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 KRT28Q7Z3Y7 464 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 NUDCD3Q8IVD9 361 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PYDC1Q8WXC3 89 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 MTMR9Q96QG7 549 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 GOLGA8MH3BSY2 632 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 JAM2P57087 298 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 KLHDC10Q6PID8 442 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PIGSQ96S52 555 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TMEM260Q9NX78 707 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TUBGCP4Q9UGJ1 667 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 GOLGA8RI6L899 631 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CAMTA2O94983 1202 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CYP1A1P04798 512 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 EIF2B2P49770 351 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 ACTR3P61158 418 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DSTYKQ6XUX3 929 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TRIM50Q86XT4 487 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ZNF564Q8TBZ8 553 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 OCEL1Q9H607 264 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 MROH7Q68CQ1 1323 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 RGL2O15211 777 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 STAT3P40763 770 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 SLC1A1P43005 524 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PDAP1Q13442 181 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 PTK6Q13882 451 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 NLRP7Q8WX94 980 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 AGBL1Q96MI9 1066 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TMEM47Q9BQJ4 181 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ADAM33Q9BZ11 813 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 AAASQ9NRG9 546 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 UVRAGQ9P2Y5 699 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 MAD2L2Q9UI95 211 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 GTPBP10A4D1E9 387 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 COPAP53621 1224 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ZBTB17Q13105 803 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CHRNA2Q15822 529 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms