RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PLCG1P19174 1290 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 MARCKSP29966 332 aaPredicted RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PLA2G5P39877 138 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 NASPP49321 788 aaPredicted RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 NOLC1Q14978 699 aaKnown RBP eCLIP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PDXDC1Q6P996 788 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 DCLRE1AQ6PJP8 1040 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 ZBTB45Q96K62 511 aaPredicted RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 REEP2Q9BRK0 252 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PTPRHQ9HD43 1115 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 ODF2LQ9ULJ1 636 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 NUB1Q9Y5A7 615 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 CACNA1HO95180 2353 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 GOLGA6L4A6NEF3 574 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 HNRNPDLO14979 420 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 TXLNAP40222 546 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 GRIN1Q05586 938 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 NAB2Q15742 525 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 HAUS6Q7Z4H7 955 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 CMASQ8NFW8 434 aaPredicted RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 FEZF2Q8TBJ5 459 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PIK3R5Q8WYR1 880 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 PARVGQ9HBI0 331 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 CCDC39Q9UFE4 941 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 POLIQ9UNA4 740 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 MYO10Q9HD67 2058 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 K7ENM7 598 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 LIG4P49917 911 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 UPP1Q16831 310 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 SEZ6Q53EL9 994 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 ARSHQ5FYA8 562 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 CYP26C1Q6V0L0 522 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 ZPBP2Q6X784 338 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 UBALD2Q8IYN6 164 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 LNX1Q8TBB1 728 aaPredicted RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 HDAC7Q8WUI4 952 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 LARP4BQ92615 738 aaKnown RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 RAD54LQ92698 747 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 ZDHHC7Q9NXF8 308 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 I3L4J1 428 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 SPTLC2O15270 562 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 C1RP00736 705 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 PROZP22891 400 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 BMP8AQ7Z5Y6 402 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 LEO1Q8WVC0 666 aaPredicted RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 EPSTI1Q96J88 318 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 SNX27Q96L92 541 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
USP6NL-203ENST00000443016 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 MORC2Q9Y6X9 1032 aaPredicted RBP9.55□□□□□ -0.88
USP6NL-203ENST00000443016 PODXLO00592 558 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 MCM4P33991 863 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 OR1D2P34982 312 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 BRCC3P46736 316 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 ME1P48163 572 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 SLC39A14Q15043 492 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 ALKAL1Q6UXT8 129 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 ANKS3Q6ZW76 656 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 FBXL6Q8N531 539 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 LINC00301Q8NCQ3 95 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 ZMAT2Q96NC0 199 aaKnown RBP9.54□□□□□ -0.88
USP6NL-203ENST00000443016 PRKD2Q9BZL6 878 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 BLOC1S4Q9NUP1 217 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 CDY1Q9Y6F8 540 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 CLUHO75153 1309 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 ZNF318Q5VUA4 2279 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 TMEM189-UBE2V1I3L0A0 370 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 PPP6R2O75170 966 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 C8AP07357 584 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 KCNE1P15382 129 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 SCP2P22307 547 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 NCKAP1LP55160 1127 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 SOX4Q06945 474 aaPredicted RBP9.54□□□□□ -0.88
USP6NL-203ENST00000443016 MCL1Q07820 350 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 LILRA6Q6PI73 481 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 C3orf58Q8NDZ4 430 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 C18orf25Q96B23 403 aaPredicted RBP9.54□□□□□ -0.88
USP6NL-203ENST00000443016 CCSER1Q9C0I3 900 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 MFSD1Q9H3U5 465 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 KCNK12Q9HB15 430 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 RCOR1Q9UKL0 485 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 TBX20Q9UMR3 447 aa9.54□□□□□ -0.88
USP6NL-203ENST00000443016 MYO15AQ9UKN7 3530 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 WDR87Q6ZQQ6 2873 aa9.53□□□□□ -0.88
USP6NL-203ENST00000443016 ABLIM1O14639 778 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms