RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 ZNF292O60281 2723 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 PODXLO00592 558 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 PRRG1O14668 218 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 SPTLC1O15269 473 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 SLC26A4O43511 780 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 HIP1RO75146 1068 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 EDN1P05305 212 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 DCNP07585 359 aaKnown RBP15.11■□□□□ 0.01
PTPRE-203ENST00000442830 PTPN2P17706 415 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 GUCY2CP25092 1073 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 TKTP29401 623 aaKnown RBP15.11■□□□□ 0.01
PTPRE-203ENST00000442830 ID4P47928 161 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 SLC44A4Q53GD3 710 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 NPAS3Q8IXF0 933 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 TCEAL8Q8IYN2 117 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 APPL2Q8NEU8 664 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 SPIRE2Q8WWL2 714 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 TSPAN18Q96SJ8 248 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 NTPCRQ9BSD7 190 aaKnown RBP15.11■□□□□ 0.01
PTPRE-203ENST00000442830 IER2Q9BTL4 223 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 PTPRHQ9HD43 1115 aa15.11■□□□□ 0.01
PTPRE-203ENST00000442830 DNMT3BQ9UBC3 853 aaKnown RBP15.11■□□□□ 0.01
PTPRE-203ENST00000442830 ADAM12O43184 909 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 LAMTOR5O43504 91 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
PTPRE-203ENST00000442830 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
PTPRE-203ENST00000442830 TOM1L1O75674 476 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ABLIM3O94929 683 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 RHOP08100 348 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 SP9P0CG40 484 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ATF2P15336 505 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 PROZP22891 400 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ABCD1P33897 745 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 NTHL1P78549 312 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ROR1Q01973 937 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ECM1Q16610 540 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 VARS2Q5ST30 1063 aaKnown RBP15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ZBTB41Q5SVQ8 909 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ZNF280DQ6N043 979 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ITFG1Q8TB96 612 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 ELSPBP1Q96BH3 223 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 PLEKHA5Q9HAU0 1116 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 OTOGLQ3ZCN5 2332 aa15.1■□□□□ 0.01
PTPRE-203ENST00000442830 PAX3P23760 479 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 RPS9P46781 194 aaKnown RBP15.09■□□□□ 0.01
PTPRE-203ENST00000442830 SNW1Q13573 536 aaKnown RBP15.09■□□□□ 0.01
PTPRE-203ENST00000442830 HYIQ5T013 277 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 IQCEQ6IPM2 695 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 RINT1Q6NUQ1 792 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 GPR161Q8N6U8 529 aaKnown RBP15.09■□□□□ 0.01
PTPRE-203ENST00000442830 RUBCNQ92622 972 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 SECISBP2LQ93073 1101 aaKnown RBP15.09■□□□□ 0.01
PTPRE-203ENST00000442830 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 SUSD3Q96L08 255 aa15.09■□□□□ 0.01
PTPRE-203ENST00000442830 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
PTPRE-203ENST00000442830 MAN2B1O00754 1011 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 PLS3P13797 630 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 MARCKSP29966 332 aaPredicted RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 BRCC3P46736 316 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 PLD1Q13393 1074 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 MRPL58Q14197 206 aaKnown RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 PPP2R5DQ14738 602 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 UBXN2BQ14CS0 331 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 CYP4A22Q5TCH4 519 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 ARL6IP4Q66PJ3 421 aaKnown RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 C1orf228Q6PIY5 440 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 CD300LGQ6UXG3 332 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 ZNF852Q6ZMS4 543 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 PDZD4Q76G19 769 aaPredicted RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 DAW1Q8N136 415 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 C3orf58Q8NDZ4 430 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 KCNN1Q92952 543 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 E2F7Q96AV8 911 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 HINFPQ9BQA5 517 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 KXD1Q9BQD3 176 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 TARS2Q9BW92 718 aaKnown RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 FAM126AQ9BYI3 521 aaPredicted RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 FOXQ1Q9C009 403 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 GPR88Q9GZN0 384 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 CXCL16Q9H2A7 254 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 CYP4F11Q9HBI6 524 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 GOLGA2P5Q9HBQ8 144 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 ZFP14Q9HCL3 533 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 LTB4R2Q9NPC1 389 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 SPATA6Q9NWH7 488 aaPredicted RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 HCFC1R1Q9NWW0 138 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 AFF4Q9UHB7 1163 aaKnown RBP15.08■□□□□ 0
PTPRE-203ENST00000442830 USP20Q9Y2K6 914 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 PCDHGA2Q9Y5H1 932 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 CACNA1AO00555 2505 aa15.08■□□□□ 0
PTPRE-203ENST00000442830 F5P12259 2224 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms