RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 COL1A2P08123 1366 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CXCL14O95715 111 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 TNNC2P02585 160 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 RHOXF2BP0C7M4 288 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 DLATP10515 647 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 DARSP14868 501 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ECHS1P30084 290 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 CYP2J2P51589 502 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 DEFB103AP81534 67 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ATF7IP2Q5U623 682 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 NPAS4Q8IUM7 802 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PAF1Q8N7H5 531 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PHOSPHO2Q8TCD6 241 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 HASPINQ8TF76 798 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 GDF15Q99988 308 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 RHOXF2Q9BQY4 288 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 KIFC3Q9BVG8 833 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 NUP58Q9BVL2 599 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 EMILIN2Q9BXX0 1053 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 UBN1Q9NPG3 1134 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 FRMD4BQ9Y2L6 1034 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 LUC7L2Q9Y383 392 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 SAR1BQ9Y6B6 198 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 A0A1W2PPC1 479 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PRRG1O14668 218 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZBTB39O15060 712 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 AKAP5P24588 427 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 HOXD13P35453 343 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 WDR5P61964 334 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PPP2R5CQ13362 524 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 NOMO2Q5JPE7 1267 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 KLHDC7AQ5VTJ3 777 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRRC43Q8N309 656 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 RPGRIP1Q96KN7 1286 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 TARS2Q9BW92 718 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 KCTD10Q9H3F6 313 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PVALEFA0A1B0GWK0 134 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 GJB5O95377 273 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 FGFR1P11362 822 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 MYOGP15173 224 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 GBP2P32456 591 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ABCD1P33897 745 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 RARRES1P49788 294 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 SPIRE1Q08AE8 756 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 IFRD2Q12894 506 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 UGCGQ16739 394 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLFN12LQ6IEE8 588 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 IQCEQ6IPM2 695 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 GUF1Q8N442 669 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 CAVIN3Q969G5 261 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 KIF12Q96FN5 646 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 TMEM117Q9H0C3 514 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 DMGDHQ9UI17 866 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCDHB2Q9Y5E7 798 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 ATP8B3O60423 1300 aa7.94□□□□□ -1.14
CDC42BPA-208ENST00000442054 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLITRK3O94933 977 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 CPP00450 1065 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 THP07101 528 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 RPL13P26373 211 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PBX2P40425 430 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 CDK7P50613 346 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 VWA3BQ502W6 1294 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 TIGD5Q53EQ6 642 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 UNC13DQ70J99 1090 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 HAUS6Q7Z4H7 955 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GDPD5Q8WTR4 605 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 JAKMIP2Q96AA8 810 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GCNAQ96QF7 691 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 ACCSQ96QU6 501 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 POLR3CQ9BUI4 534 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 MFSD1Q9H3U5 465 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCIF1Q9H4Z3 704 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GDF3Q9NR23 364 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM105AQ9NUU6 356 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GUCA1BQ9UMX6 200 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 PPME1Q9Y570 386 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 LOXHD1Q8IVV2 1947 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 DPYSL4O14531 572 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 ENPP3O14638 875 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 MED24O75448 989 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GAP43P17677 238 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 NOP2P46087 812 aaKnown RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 GPC3P51654 580 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 LPIN1Q14693 890 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM26FQ5R3K3 315 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 BEST2Q8NFU1 509 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 SYN2Q92777 582 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 IQCDQ96DY2 449 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 SAMD11Q96NU1 681 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 RNF19AQ9NV58 838 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 HES2Q9Y543 173 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 MAFBQ9Y5Q3 323 aaPredicted RBP7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 WDR81Q562E7 1941 aa7.93□□□□□ -1.14
CDC42BPA-208ENST00000442054 IGLV3-22A0A075B6J6 115 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms