RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 HCFC1R1Q9NWW0 138 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 KCND2Q9NZV8 630 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 CNTN3Q9P232 1028 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 NUB1Q9Y5A7 615 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 GVINP1Q7Z2Y8 2422 aa12.72□□□□□ -0.37
UBE2D4-204ENST00000440899 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 FRYLO94915 3013 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 ARHGEF37A1IGU5 675 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 H3BQV1 296 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 H7C4K7 107 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 PRRG1O14668 218 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 CLDN3O15551 220 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 DCNP07585 359 aaKnown RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 PTPN2P17706 415 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 ROR1Q01973 937 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 MRPL58Q14197 206 aaKnown RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 NOLC1Q14978 699 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 ZPBP2Q6X784 338 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 C18orf25Q96B23 403 aaPredicted RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 PNMA5Q96PV4 448 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 GDE1Q9NZC3 331 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 DLGAP2Q9P1A6 1054 aa12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.37
UBE2D4-204ENST00000440899 ZNF292O60281 2723 aa12.71□□□□□ -0.38
UBE2D4-204ENST00000440899 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 WDR27A2RRH5 827 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 H0YCG3 227 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 LRG1P02750 347 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 RHOP08100 348 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PLA2G4BP0C869 781 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 ATF2P15336 505 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SLC12A3P55017 1021 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PFKPQ01813 784 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PRKCQQ04759 706 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 MCL1Q07820 350 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SNW1Q13573 536 aaKnown RBP12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SLC10A6Q3KNW5 377 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SLC44A4Q53GD3 710 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SPECC1Q5M775 1068 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PJA1Q8NG27 643 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 ING5Q8WYH8 240 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 TMX3Q96JJ7 454 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 SUSD3Q96L08 255 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PLIN2Q99541 437 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 PLEKHA5Q9HAU0 1116 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 ANKFY1Q9P2R3 1169 aa12.7□□□□□ -0.38
UBE2D4-204ENST00000440899 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 ZNF197O14709 1029 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 SLC26A4O43511 780 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 ECI2O75521 394 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 CLTAP09496 248 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 SCP2P22307 547 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 GJB2P29033 226 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 ARPP19P56211 112 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 MLF2Q15773 248 aaPredicted RBP12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 CTXN3Q4LDR2 81 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 TMEM119Q4V9L6 283 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 C1orf210Q8IVY1 113 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 MCRS1Q96EZ8 462 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 AK8Q96MA6 479 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 KXD1Q9BQD3 176 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 FOXQ1Q9C009 403 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 CYP4F11Q9HBI6 524 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 FBXL5Q9UKA1 691 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.69□□□□□ -0.38
UBE2D4-204ENST00000440899 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 SEC24AO95486 1093 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 MCM4P33991 863 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 MATR3P43243 847 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 KYAT1Q16773 422 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 SEZ6Q53EL9 994 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 ARSHQ5FYA8 562 aa12.68□□□□□ -0.38
UBE2D4-204ENST00000440899 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms