RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GRAMD1CQ8IYS0 662 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 SYCP3Q8IZU3 236 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 GJD3Q8N144 294 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 GLIS3Q8NEA6 775 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 POMGNT1Q8WZA1 660 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 SUSD6Q92537 303 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 KIF12Q96FN5 646 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 GDPD2Q9HCC8 539 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 FNIP2Q9P278 1114 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 TUBGCP4Q9UGJ1 667 aa25.73■■□□□ 1.71
VARS-217ENST00000440048 RPL17P18621 184 aaKnown RBP25.72■■□□□ 1.71
VARS-217ENST00000440048 BRCC3P46736 316 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 CUL4BQ13620 913 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.72■■□□□ 1.71
VARS-217ENST00000440048 ADHFE1Q8IWW8 467 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 C12orf76Q8N812 135 aaPredicted RBP25.72■■□□□ 1.71
VARS-217ENST00000440048 PIK3R5Q8WYR1 880 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 FAM212AQ96EL1 285 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 FBXL18Q96ME1 805 aa25.72■■□□□ 1.71
VARS-217ENST00000440048 MTCL1Q9Y4B5 1905 aaKnown RBP25.71■■□□□ 1.71
VARS-217ENST00000440048 FAM237AA0A1B0GTK4 181 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 I3L4J1 428 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 FGFR3P22607 806 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 CREMQ03060 361 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 FAM26FQ5R3K3 315 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 STXBP4Q6ZWJ1 553 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 TMEM130Q8N3G9 435 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 LNX1Q8TBB1 728 aaPredicted RBP25.71■■□□□ 1.71
VARS-217ENST00000440048 TMEM206Q9H813 350 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 USP25Q9UHP3 1055 aa25.71■■□□□ 1.71
VARS-217ENST00000440048 A0A1W2PQ27 194 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 A0A1W2PQ64 194 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 A0A1W2PQD8 194 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 TRAPPC3O43617 180 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 GLUD1P00367 558 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 SSTR3P32745 418 aaPredicted RBP25.7■■□□□ 1.7
VARS-217ENST00000440048 NDUFA8P51970 172 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 EHHADHQ08426 723 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 PSMD5Q16401 504 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 RARS2Q5T160 578 aaKnown RBP25.7■■□□□ 1.7
VARS-217ENST00000440048 KANK3Q6NY19 840 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 CRELD2Q6UXH1 353 aaPredicted RBP25.7■■□□□ 1.7
VARS-217ENST00000440048 GLYCTKQ8IVS8 523 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 CD302Q8IX05 232 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 PAGE5Q96GU1 130 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 TSPAN18Q96SJ8 248 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 ADAM7Q9H2U9 754 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 CDH22Q9UJ99 828 aa25.7■■□□□ 1.7
VARS-217ENST00000440048 UBQLN1Q9UMX0 589 aaKnown RBP25.7■■□□□ 1.7
VARS-217ENST00000440048 PVALEFA0A1B0GWK0 134 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 C19orf67A6NJJ6 358 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 CYP3A5P20815 502 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 GARTP22102 1010 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 TKTP29401 623 aaKnown RBP25.69■■□□□ 1.7
VARS-217ENST00000440048 LRPAP1P30533 357 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 SYKP43405 635 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 ITIH3Q06033 890 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 JADE1Q6IE81 842 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 CES5AQ6NT32 575 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 EPM2AIP1Q7L775 607 aaPredicted RBP25.69■■□□□ 1.7
VARS-217ENST00000440048 PALB2Q86YC2 1186 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 FSIP1Q8NA03 581 aa25.69■■□□□ 1.7
VARS-217ENST00000440048 POP1Q99575 1024 aaKnown RBP25.69■■□□□ 1.7
VARS-217ENST00000440048 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.69■■□□□ 1.7
VARS-217ENST00000440048 EIF3DO15371 548 aaKnown RBP eCLIP25.68■■□□□ 1.7
VARS-217ENST00000440048 XPOTO43592 962 aaKnown RBP25.68■■□□□ 1.7
VARS-217ENST00000440048 HOXD13P35453 343 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 GUCY2FP51841 1108 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 POU5F1Q01860 360 aaKnown RBP25.68■■□□□ 1.7
VARS-217ENST00000440048 CBX2Q14781 532 aaPredicted RBP25.68■■□□□ 1.7
VARS-217ENST00000440048 PDXDC1Q6P996 788 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 ZSWIM2Q8NEG5 633 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 CLSTN3Q9BQT9 956 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 CBWD1Q9BRT8 395 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 FAM213AQ9BRX8 229 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 ASB7Q9H672 318 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 SFXN1Q9H9B4 322 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 MAN1C1Q9NR34 630 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 NUB1Q9Y5A7 615 aa25.68■■□□□ 1.7
VARS-217ENST00000440048 C1RP00736 705 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 NFICP08651 508 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 SPATA31D3P0C874 917 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 SPATA1Q5VX52 437 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 LILRA6Q6PI73 481 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 SPATA31D4Q6ZUB0 917 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 ZNF507Q8TCN5 953 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 SAAL1Q96ER3 474 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 PHF7Q9BWX1 381 aaPredicted RBP25.67■■□□□ 1.7
VARS-217ENST00000440048 GOLPH3LQ9H4A5 285 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 DERAQ9Y315 318 aa25.67■■□□□ 1.7
VARS-217ENST00000440048 SPDYE4A6NLX3 237 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 ADAM12O43184 909 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 TGM5O43548 720 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 KLRC4O43908 158 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 WEE2P0C1S8 567 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 TMEM132DQ14C87 1099 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 TMC5Q6UXY8 1006 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 BEST2Q8NFU1 509 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 FEZF2Q8TBJ5 459 aa25.66■■□□□ 1.7
VARS-217ENST00000440048 PCIF1Q9H4Z3 704 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms