RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 FGFBP2Q9BYJ0 223 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 FNIP2Q9P278 1114 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 CPSF3Q9UKF6 684 aaKnown RBP26.15■■□□□ 1.78
CPNE1-217ENST00000439669 AGO2Q9UKV8 859 aaKnown RBP26.15■■□□□ 1.78
CPNE1-217ENST00000439669 NUB1Q9Y5A7 615 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-217ENST00000439669 ACOT2P49753 483 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 PDXDC1Q6P996 788 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 TMC5Q6UXY8 1006 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 RPGRIP1Q96KN7 1286 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 RIPOR3Q96MK2 946 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 UBQLN1Q9UMX0 589 aaKnown RBP26.14■■□□□ 1.78
CPNE1-217ENST00000439669 STYXL1Q9Y6J8 313 aa26.14■■□□□ 1.78
CPNE1-217ENST00000439669 PDCD11Q14690 1871 aaKnown RBP26.14■■□□□ 1.78
CPNE1-217ENST00000439669 PLXNA3P51805 1871 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 FGFR3P22607 806 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 TKTP29401 623 aaKnown RBP26.13■■□□□ 1.77
CPNE1-217ENST00000439669 MTHFRP42898 656 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 POSTNQ15063 836 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 STXBP4Q6ZWJ1 553 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 CEP57L1Q8IYX8 460 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 LNX1Q8TBB1 728 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-217ENST00000439669 KHSRPQ92945 711 aaKnown RBP eCLIP26.13■■□□□ 1.778e-8■■■□□ 15.7
CPNE1-217ENST00000439669 NECTIN4Q96NY8 510 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 C7orf25Q9BPX7 421 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 DPP7Q9UHL4 492 aa26.13■■□□□ 1.77
CPNE1-217ENST00000439669 TGM5O43548 720 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 XPOTO43592 962 aaKnown RBP26.12■■□□□ 1.77
CPNE1-217ENST00000439669 PRPF6O94906 941 aaKnown RBP26.12■■□□□ 1.77
CPNE1-217ENST00000439669 SPATA31D3P0C874 917 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 MCM4P33991 863 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 AFMP43652 599 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 ATAT1Q5SQI0 421 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 SPATA31D4Q6ZUB0 917 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 HPS3Q969F9 1004 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 BLZF1Q9H2G9 400 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 POMKQ9H5K3 350 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-217ENST00000439669 VWA8A3KMH1 1905 aa26.12■■□□□ 1.77
CPNE1-217ENST00000439669 PFKFB1P16118 471 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 SP100P23497 879 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-217ENST00000439669 CASP1P29466 404 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 JADE1Q6IE81 842 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 CNNM4Q6P4Q7 775 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 CD302Q8IX05 232 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 TMEM130Q8N3G9 435 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 CLSTN3Q9BQT9 956 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 SCAND2PQ9GZW5 306 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-217ENST00000439669 TMEM206Q9H813 350 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 SERTAD1Q9UHV2 236 aa26.11■■□□□ 1.77
CPNE1-217ENST00000439669 A0A1B0GVL5 298 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 LOC730098B7Z3J9 87 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 CMA1P23946 247 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 ADSSP30520 456 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 GLIS3Q8NEA6 775 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 TSPAN18Q96SJ8 248 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 EPHX3Q9H6B9 360 aa26.1■■□□□ 1.77
CPNE1-217ENST00000439669 TULP1O00294 542 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-217ENST00000439669 ADRB2P07550 413 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 NFICP08651 508 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 CYP3A5P20815 502 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 LRPAP1P30533 357 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 GUCY2FP51841 1108 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 TMEM132DQ14C87 1099 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 ZBTB6Q15916 424 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 FAM26FQ5R3K3 315 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 ANKS3Q6ZW76 656 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 UNC13DQ70J99 1090 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 GPR149Q86SP6 731 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 GRAMD1CQ8IYS0 662 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 BEST2Q8NFU1 509 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 FEZF2Q8TBJ5 459 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 SAAL1Q96ER3 474 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 PLEKHA4Q9H4M7 779 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 MTRRQ9UBK8 725 aa26.09■■□□□ 1.77
CPNE1-217ENST00000439669 SYN3O14994 580 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 ADAM12O43184 909 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 ACTN4O43707 911 aaKnown RBP26.08■■□□□ 1.77
CPNE1-217ENST00000439669 C1RP00736 705 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 SLFN14P0C7P3 912 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 RNF135Q8IUD6 432 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 KREMEN2Q8NCW0 462 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 NOC3LQ8WTT2 800 aaKnown RBP26.08■■□□□ 1.77
CPNE1-217ENST00000439669 HDAC7Q8WUI4 952 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 SUSD3Q96L08 255 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 FAM213AQ9BRX8 229 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 NR2E1Q9Y466 385 aa26.08■■□□□ 1.77
CPNE1-217ENST00000439669 CCDC195A0A1B0GUA6 201 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 RFPL2O75678 378 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 GARTP22102 1010 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 OR1D2P34982 312 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 NUCB2P80303 420 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 CUL4BQ13620 913 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 VARS2Q5ST30 1063 aaKnown RBP26.07■■□□□ 1.76
CPNE1-217ENST00000439669 SPATA1Q5VX52 437 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 ARMCX5Q6P1M9 558 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 LILRA6Q6PI73 481 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 C15orf39Q6ZRI6 1047 aa26.07■■□□□ 1.76
CPNE1-217ENST00000439669 CMASQ8NFW8 434 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms