RNA–Protein interactions for RNA: ENST00000438470.5

TNFSF13-207, Transcript of TNF superfamily member 13, humanhuman

TSL 3

Gene TNFSF13, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-207ENST00000438470 PLIN2Q99541 437 aa18.28■□□□□ 0.52
TNFSF13-207ENST00000438470 SLC2A4RGQ9NR83 387 aa18.28■□□□□ 0.52
TNFSF13-207ENST00000438470 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
TNFSF13-207ENST00000438470 RIF1Q5UIP0 2472 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 VWA3AA6NCI4 1184 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 PLS3P13797 630 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 KCNE1P15382 129 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 GJB2P29033 226 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 SLC12A3P55017 1021 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 ROR1Q01973 937 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 STRN3Q13033 797 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 PABPC1LQ4VXU2 614 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 VARS2Q5ST30 1063 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 SYT2Q8N9I0 419 aaPredicted RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 TMEM161BQ8NDZ6 487 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 SPIRE2Q8WWL2 714 aa18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 C18orf25Q96B23 403 aaPredicted RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 ZBTB45Q96K62 511 aaPredicted RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 NTPCRQ9BSD7 190 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-207ENST00000438470 FANCMQ8IYD8 2048 aa18.27■□□□□ 0.51
TNFSF13-207ENST00000438470 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 PTPRZ1P23471 2315 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 H3BQV1 296 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 TOM1L1O75674 476 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 SLC8B1Q6J4K2 584 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 MTSS1LQ765P7 747 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 RTL10Q7L3V2 364 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 NPAS3Q8IXF0 933 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 ING5Q8WYH8 240 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 NKD2Q969F2 451 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 CDK5RAP3Q96JB5 506 aa18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 DNMT3BQ9UBC3 853 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-207ENST00000438470 ANK1P16157 1881 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 SYN3O14994 580 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 MAPTP10636 758 aaKnown RBP18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 SMTNP53814 917 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 GPC5P78333 572 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 TMEM119Q4V9L6 283 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 KCTD17Q8N5Z5 321 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 KXD1Q9BQD3 176 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 KCND2Q9NZV8 630 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 TUBGCP4Q9UGJ1 667 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 NUB1Q9Y5A7 615 aa18.25■□□□□ 0.51
TNFSF13-207ENST00000438470 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 DCNP07585 359 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 PLA2G4BP0C869 781 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 RPL9P32969 192 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 ARPP19P56211 112 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 SLC5A9Q2M3M2 681 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 SPECC1Q5M775 1068 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 ARL6IP4Q66PJ3 421 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 ZPBP2Q6X784 338 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 ZNF461Q8TAF7 563 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 FOXQ1Q9C009 403 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 KCNG1Q9UIX4 513 aa18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.24■□□□□ 0.51
TNFSF13-207ENST00000438470 TSC2P49815 1807 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 CACNA1IQ9P0X4 2223 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 ARHGEF37A1IGU5 675 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 PRRG1O14668 218 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 TBC1D4O60343 1298 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 ABLIM3O94929 683 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 LRG1P02750 347 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 RHOP08100 348 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 CXCL8P10145 99 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 MCM4P33991 863 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 MCL1Q07820 350 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 TMEM130Q8N3G9 435 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 PJA1Q8NG27 643 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 HAPLN2Q9GZV7 340 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 DLGAP2Q9P1A6 1054 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 FBXL5Q9UKA1 691 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 MRPS23Q9Y3D9 190 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 SIT1Q9Y3P8 196 aa18.23■□□□□ 0.51
TNFSF13-207ENST00000438470 H7C4K7 107 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 CLDN3O15551 220 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 ATF2P15336 505 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 ELF1P32519 619 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 MATR3P43243 847 aaKnown RBP eCLIP18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 NCKAP1LP55160 1127 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 STARD6P59095 220 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 MRPL58Q14197 206 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 ARSHQ5FYA8 562 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 LRRC15Q8TF66 581 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 BICD1Q96G01 975 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 AK8Q96MA6 479 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 REEP2Q9BRK0 252 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 CYP4F11Q9HBI6 524 aa18.22■□□□□ 0.51
TNFSF13-207ENST00000438470 LARSQ9P2J5 1176 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms