RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
SNHG3-202ENST00000437681 DPH6Q7L8W6 267 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 NAT10Q9H0A0 1025 aaKnown RBP12.42□□□□□ -0.42
SNHG3-202ENST00000437681 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNHG3-202ENST00000437681 POU2F2P09086 479 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 CXCL8P10145 99 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 KRT13P13646 458 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 NR2F2P24468 414 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 AKAP5P24588 427 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 PBX2P40425 430 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 ADAM9Q13443 819 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 HPS3Q969F9 1004 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 FAM213AQ9BRX8 229 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 PLAGL2Q9UPG8 496 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 CENPFP49454 3210 aa12.42□□□□□ -0.42
SNHG3-202ENST00000437681 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 M0QZQ0 153 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 NRP1O14786 923 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 MEFVO15553 781 aaPredicted RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 DDHD2O94830 711 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TNNC2P02585 160 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SOD2P04179 222 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 BMP6P22004 513 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SLC11A1P49279 550 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 GPM6BQ13491 265 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 RNF169Q8NCN4 708 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 NELFBQ8WX92 580 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TMEM169Q96HH4 297 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 RXFP1Q9HBX9 757 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 ADAM28Q9UKQ2 775 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 ATG2AQ2TAZ0 1938 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TSC2P49815 1807 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 FGF18O76093 207 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 CYP11A1P05108 521 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 CTSAP10619 480 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 PSEN1P49768 467 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TERF1P54274 439 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 RBP5P82980 135 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 DMTNQ08495 405 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SMC1AQ14683 1233 aaKnown RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SV2CQ496J9 727 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 CYP26C1Q6V0L0 522 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 LIMS2Q7Z4I7 341 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 PARD3BQ8TEW8 1205 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SUSD3Q96L08 255 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 FAM81BQ96LP2 452 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 GAS2L1Q99501 681 aaPredicted RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 ZBP1Q9H171 429 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 GDAP2Q9NXN4 497 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 DPP7Q9UHL4 492 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 HES2Q9Y543 173 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 H7C4K7 107 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TNFSF9P41273 254 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 DSG1Q02413 1049 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 JADE1Q6IE81 842 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 ELMSAN1Q6PJG2 1045 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 FAM186BQ8IYM0 893 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 DNAI2Q9GZS0 605 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 TTYH1Q9H313 450 aaPredicted RBP12.41□□□□□ -0.42
SNHG3-202ENST00000437681 MARCH5Q9NX47 278 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 HSFX1Q9UBD0 423 aa12.41□□□□□ -0.42
SNHG3-202ENST00000437681 PODXLO00592 558 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 FGFR3P22607 806 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
SNHG3-202ENST00000437681 ANKRD40Q6AI12 368 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 CEP120Q8N960 986 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 APPL2Q8NEU8 664 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 ZMAT2Q96NC0 199 aaKnown RBP12.4□□□□□ -0.42
SNHG3-202ENST00000437681 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
SNHG3-202ENST00000437681 MEIS3P2A8K0S8 358 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 ZC3H11AO75152 810 aaKnown RBP eCLIP12.4□□□□□ -0.434e-20■■■■■ 59.1
SNHG3-202ENST00000437681 ACOT2P49753 483 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 GATMP50440 423 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 VAMP7P51809 220 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 BFSP1Q12934 665 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 USP41Q3LFD5 358 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.43
SNHG3-202ENST00000437681 TMEM184AQ6ZMB5 413 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms