RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 FAM237AA0A1B0GTK4 181 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 EIF3DO15371 548 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMPD4-207ENST00000435455 TEX28O15482 410 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 ANK1P16157 1881 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 CYP3A5P20815 502 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 GARTP22102 1010 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 SYKP43405 635 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 ITIH3Q06033 890 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 CEP57Q86XR8 500 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 ADHFE1Q8IWW8 467 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 POP1Q99575 1024 aaKnown RBP17.68■□□□□ 0.42
SMPD4-207ENST00000435455 FGFBP2Q9BYJ0 223 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 S1PR5Q9H228 398 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 DERAQ9Y315 318 aa17.68■□□□□ 0.42
SMPD4-207ENST00000435455 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
SMPD4-207ENST00000435455 PLXNA3P51805 1871 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
SMPD4-207ENST00000435455 LDHAP00338 332 aaKnown RBP17.67■□□□□ 0.42
SMPD4-207ENST00000435455 GLUD1P00367 558 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 FGFR3P22607 806 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 ADSSP30520 456 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 LRPAP1P30533 357 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 ACOT2P49753 483 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 CUL4BQ13620 913 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 ZBTB6Q15916 424 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 PSMD5Q16401 504 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 RTP2Q5QGT7 225 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 CES5AQ6NT32 575 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 CD300LGQ6UXG3 332 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 GRAMD1CQ8IYS0 662 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 C3orf58Q8NDZ4 430 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 BEST2Q8NFU1 509 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 SUSD6Q92537 303 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 FAM212AQ96EL1 285 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 FBXL18Q96ME1 805 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 BLZF1Q9H2G9 400 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 IKZF4Q9H2S9 585 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 ASB7Q9H672 318 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 UBE4BO95155 1302 aa17.67■□□□□ 0.42
SMPD4-207ENST00000435455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.66■□□□□ 0.42
SMPD4-207ENST00000435455 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 KIAA0391O15091 583 aaKnown RBP17.66■□□□□ 0.42
SMPD4-207ENST00000435455 IL18RAPO95256 599 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 MYL1P05976 194 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 CASP1P29466 404 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 NDUFA8P51970 172 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 ZP2Q05996 745 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 EHHADHQ08426 723 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 JADE1Q6IE81 842 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 PRSS55Q6UWB4 352 aaPredicted RBP17.66■□□□□ 0.42
SMPD4-207ENST00000435455 EPM2AIP1Q7L775 607 aaPredicted RBP17.66■□□□□ 0.42
SMPD4-207ENST00000435455 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 HPS3Q969F9 1004 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 ADAM7Q9H2U9 754 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 GDPD2Q9HCC8 539 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 TUBGCP4Q9UGJ1 667 aa17.66■□□□□ 0.42
SMPD4-207ENST00000435455 MUC3AQ02505 3323 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 MTHFRP42898 656 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 BRCC3P46736 316 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 SPAG1Q07617 926 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 CBX2Q14781 532 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 TMEM132DQ14C87 1099 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 RARS2Q5T160 578 aaKnown RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 CRELD2Q6UXH1 353 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 ANKS3Q6ZW76 656 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 LNX1Q8TBB1 728 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 RIPOR3Q96MK2 946 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 NECTIN4Q96NY8 510 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 APOL5Q9BWW9 433 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 PHF7Q9BWX1 381 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 SFXN1Q9H9B4 322 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 EXOC1Q9NV70 894 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 CIZ1Q9ULV3 898 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-207ENST00000435455 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
SMPD4-207ENST00000435455 GOLGA6L4A6NEF3 574 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 SYN3O14994 580 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 RPL17P18621 184 aaKnown RBP17.64■□□□□ 0.41
SMPD4-207ENST00000435455 PAX3P23760 479 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 IGFBP6P24592 240 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-207ENST00000435455 TKTP29401 623 aaKnown RBP17.64■□□□□ 0.41
SMPD4-207ENST00000435455 SSTR3P32745 418 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-207ENST00000435455 MCM4P33991 863 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 PALB2Q86YC2 1186 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 GLYCTKQ8IVS8 523 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 GJD3Q8N144 294 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 C12orf76Q8N812 135 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-207ENST00000435455 CCDC34Q96HJ3 373 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 SUSD3Q96L08 255 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 CLSTN3Q9BQT9 956 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 CBWD1Q9BRT8 395 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 FAM213AQ9BRX8 229 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 MAN1C1Q9NR34 630 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms