RNA–Protein interactions for RNA: ENST00000433909.2

CCDC189-201, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,157 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-201ENST00000433909 PABPC1LQ4VXU2 614 aaKnown RBP21.33■■□□□ 1.01
CCDC189-201ENST00000433909 VARS2Q5ST30 1063 aaKnown RBP21.33■■□□□ 1.01
CCDC189-201ENST00000433909 RTL10Q7L3V2 364 aa21.33■■□□□ 1.01
CCDC189-201ENST00000433909 ASCL5Q7RTU5 278 aa21.33■■□□□ 1.01
CCDC189-201ENST00000433909 C18orf25Q96B23 403 aaPredicted RBP21.33■■□□□ 1.01
CCDC189-201ENST00000433909 DNMT3BQ9UBC3 853 aaKnown RBP21.33■■□□□ 1.01
CCDC189-201ENST00000433909 VPS13AQ96RL7 3174 aa21.33■■□□□ 1
CCDC189-201ENST00000433909 NPHP3-ACAD11A0A0J9YXS1 232 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 SYN3O14994 580 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 MEFVO15553 781 aaPredicted RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 MAPTP10636 758 aaKnown RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 RPL9P32969 192 aaKnown RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 ARPP19P56211 112 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 ROR1Q01973 937 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 CACNB1Q02641 598 aaPredicted RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 TMEM119Q4V9L6 283 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 SEZ6Q53EL9 994 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 ARL6IP4Q66PJ3 421 aaKnown RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 SLC8B1Q6J4K2 584 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 MTSS1LQ765P7 747 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
CCDC189-201ENST00000433909 KCND2Q9NZV8 630 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 KCNH3Q9ULD8 1083 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 SMC3Q9UQE7 1217 aa21.32■■□□□ 1
CCDC189-201ENST00000433909 PRR23AA6NEV1 266 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 ELF1P32519 619 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 MATR3P43243 847 aaKnown RBP eCLIP21.31■■□□□ 1
CCDC189-201ENST00000433909 GPC5P78333 572 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 SPECC1Q5M775 1068 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 PHLDB3Q6NSJ2 640 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 ZPBP2Q6X784 338 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 ING5Q8WYH8 240 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 BICD1Q96G01 975 aa21.31■■□□□ 1
CCDC189-201ENST00000433909 MRPS23Q9Y3D9 190 aaKnown RBP21.31■■□□□ 1
CCDC189-201ENST00000433909 WDR27A2RRH5 827 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 H7C4K7 107 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 PRRG1O14668 218 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 CLDN3O15551 220 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 LRG1P02750 347 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 SLC10A6Q3KNW5 377 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 NPAS3Q8IXF0 933 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 ZNF461Q8TAF7 563 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 NKD2Q969F2 451 aaPredicted RBP21.3■■□□□ 1
CCDC189-201ENST00000433909 LARSQ9P2J5 1176 aaKnown RBP21.3■■□□□ 1
CCDC189-201ENST00000433909 GVINP1Q7Z2Y8 2422 aa21.3■■□□□ 1
CCDC189-201ENST00000433909 H0YCG3 227 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 ABLIM3O94929 683 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 DCNP07585 359 aaKnown RBP21.29■■□□□ 1
CCDC189-201ENST00000433909 RHOP08100 348 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 MCM4P33991 863 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 MCM2P49736 904 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 MCL1Q07820 350 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 ARSHQ5FYA8 562 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 SUSD3Q96L08 255 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 AK8Q96MA6 479 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 KXD1Q9BQD3 176 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 CYP4F11Q9HBI6 524 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 TUBGCP4Q9UGJ1 667 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 FBXL5Q9UKA1 691 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 SIT1Q9Y3P8 196 aa21.29■■□□□ 1
CCDC189-201ENST00000433909 SPTBN4Q9H254 2564 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 ARHGEF37A1IGU5 675 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 TBC1D4O60343 1298 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 CXCL8P10145 99 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 UBA7P41226 1012 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 NCKAP1LP55160 1127 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 MRPL58Q14197 206 aaKnown RBP21.28■■□□□ 1
CCDC189-201ENST00000433909 DHX8Q14562 1220 aaKnown RBP21.28■■□□□ 1
CCDC189-201ENST00000433909 CTXN3Q4LDR2 81 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 LARP1BQ659C4 914 aaKnown RBP21.28■■□□□ 1
CCDC189-201ENST00000433909 ZNF280DQ6N043 979 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 GPBP1Q86WP2 473 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 CALML4Q96GE6 196 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 SHDQ96IW2 340 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 TBC1D32Q96NH3 1257 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 FOXQ1Q9C009 403 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.28■■□□□ 1
CCDC189-201ENST00000433909 CITO14578 2027 aa21.28■■□□□ 1
CCDC189-201ENST00000433909 EP300Q09472 2414 aaPredicted RBP21.27■■□□□ 1
CCDC189-201ENST00000433909 SLC26A4O43511 780 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 CLTAP09496 248 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 ATF2P15336 505 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 PTPN2P17706 415 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 SPAG1Q07617 926 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 SNW1Q13573 536 aaKnown RBP21.27■■□□□ 1
CCDC189-201ENST00000433909 SLC5A9Q2M3M2 681 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 HAUS6Q7Z4H7 955 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 TCEAL8Q8IYN2 117 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 APPL2Q8NEU8 664 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 DDX12PQ92771 950 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 MCRS1Q96EZ8 462 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 REEP2Q9BRK0 252 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 HAPLN2Q9GZV7 340 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 ODF2LQ9ULJ1 636 aa21.27■■□□□ 1
CCDC189-201ENST00000433909 SEC24AO95486 1093 aa21.26■□□□□ 0.99
CCDC189-201ENST00000433909 MARCKSP29966 332 aaPredicted RBP21.26■□□□□ 0.99
CCDC189-201ENST00000433909 LIG4P49917 911 aa21.26■□□□□ 0.99
CCDC189-201ENST00000433909 STARD6P59095 220 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms