RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SNTG2Q9NY99 539 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 C2CD2Q9Y426 696 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 PDCD11Q14690 1871 aaKnown RBP19.66■□□□□ 0.74
HMGN1-206ENST00000431390 VNN1O95497 513 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 HLA-DRAP01903 254 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 TNNC2P02585 160 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 ZSCAN20P17040 1043 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-206ENST00000431390 PIK3CAP42336 1068 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 JAM2P57087 298 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 WDR59Q6PJI9 974 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 CYP26C1Q6V0L0 522 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 TRAPPC11Q7Z392 1133 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 SNX27Q96L92 541 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 FAM81BQ96LP2 452 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 NT5C1BQ96P26 610 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 TRAIPQ9BWF2 469 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 MTMR12Q9C0I1 747 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 NXF3Q9H4D5 531 aaKnown RBP19.66■□□□□ 0.74
HMGN1-206ENST00000431390 DNAJC12Q9UKB3 198 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 PYCARDQ9ULZ3 195 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 DERAQ9Y315 318 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 TRIP11Q15643 1979 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 PITPNM1O00562 1244 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 PHACTR2O75167 634 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 SELPP16109 830 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 MSNP26038 577 aaKnown RBP19.65■□□□□ 0.74
HMGN1-206ENST00000431390 CD52P31358 61 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 TFAMQ00059 246 aaKnown RBP19.65■□□□□ 0.74
HMGN1-206ENST00000431390 SFMBT2Q5VUG0 894 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 JADE1Q6IE81 842 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 LRRC8DQ7L1W4 858 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 FMNL3Q8IVF7 1028 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 TOX2Q96NM4 488 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 TSPAN18Q96SJ8 248 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 STK33Q9BYT3 514 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 AIPL1Q9NZN9 384 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 IPPQ9Y573 584 aa19.65■□□□□ 0.74
HMGN1-206ENST00000431390 LRRN2O75325 713 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 RECQL4O94761 1208 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 NFICP08651 508 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 CLTBP09497 229 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 FOSL2P15408 326 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 EPHB4P54760 987 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 RAPGEF1Q13905 1077 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 DSC3Q14574 896 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 TMEM132DQ14C87 1099 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 GJB7Q6PEY0 223 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 FAM43BQ6ZT52 329 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-206ENST00000431390 HACE1Q8IYU2 909 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 SMG8Q8ND04 991 aaKnown RBP19.64■□□□□ 0.73
HMGN1-206ENST00000431390 FAM84AQ96KN4 292 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 RNPC3Q96LT9 517 aaKnown RBP19.64■□□□□ 0.73
HMGN1-206ENST00000431390 OSBPL7Q9BZF2 842 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 UBE2TQ9NPD8 197 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-206ENST00000431390 FAM105AQ9NUU6 356 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 CNTN3Q9P232 1028 aa19.64■□□□□ 0.73
HMGN1-206ENST00000431390 AJAP1Q9UKB5 411 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-206ENST00000431390 ESPNB1AK53 854 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 PQBP1O60828 265 aaKnown RBP19.63■□□□□ 0.73
HMGN1-206ENST00000431390 RAB27AP51159 221 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 NCOA4Q13772 614 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 ALKAL1Q6UXT8 129 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 ARHGEF19Q8IW93 802 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 KIAA1524Q8TCG1 905 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 C1orf112Q9NSG2 853 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 HES2Q9Y543 173 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 PCDHB2Q9Y5E7 798 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 TANC1Q9C0D5 1861 aa19.63■□□□□ 0.73
HMGN1-206ENST00000431390 DCDC2CA8MYV0 355 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 STAT1P42224 750 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 GCNT1Q02742 428 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 MBTPS1Q14703 1052 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 XKR4Q5GH76 650 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 E4F1Q66K89 784 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-206ENST00000431390 ENOSF1Q7L5Y1 443 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 HELQQ8TDG4 1101 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 IMPG2Q9BZV3 1241 aa19.62■□□□□ 0.73
HMGN1-206ENST00000431390 SOWAHDA6NJG2 315 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 F8VZ95 297 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 ZNF623O75123 536 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 RAG1P15918 1043 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 MFAP3P55082 362 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 TRPC3Q13507 836 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 DRAP1Q14919 205 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-206ENST00000431390 ASIC2Q16515 512 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 PPM1KQ8N3J5 372 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 KIF12Q96FN5 646 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 CHP1Q99653 195 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 APOL6Q9BWW8 343 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 KIAA0355O15063 1070 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 ASS1P00966 412 aaKnown RBP19.61■□□□□ 0.73
HMGN1-206ENST00000431390 SERPING1P05155 500 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 SKIP12755 728 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 KCNE1P15382 129 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 AKAP5P24588 427 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 SOX5P35711 763 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 SGSM1Q2NKQ1 1148 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 MRPL10Q7Z7H8 261 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms