RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 GBP3Q9H0R5 595 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 WNT8AQ9H1J5 351 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 ERVK-5Q9HDB9 667 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 ANO10Q9NW15 660 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 TMEM63CQ9P1W3 806 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 MAN1B1Q9UKM7 699 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 PADI3Q9ULW8 664 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 ST3GAL5Q9UNP4 418 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 TNFSF13BQ9Y275 285 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 ADGRA3Q8IWK6 1321 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 LTBP2Q14767 1821 aa7.68□□□□□ -1.18
EPHA4-206ENST00000424339 DNAH12Q6ZR08 3092 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 PDXKO00764 312 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 TSPAN1O60635 241 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 NBNO60934 754 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 LDHAP00338 332 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 FBXO45P0C2W1 286 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 GHRP10912 638 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 GARTP22102 1010 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 RPL13P26373 211 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 CASP1P29466 404 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 NMT1P30419 496 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 LRRC63Q05C16 580 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 CCDC173Q0VFZ6 552 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 STK4Q13043 487 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 IKBKEQ14164 716 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 STX1AQ16623 288 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 NFIL3Q16649 462 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 EDRF1Q3B7T1 1238 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 ATF7IP2Q5U623 682 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 SLC27A1Q6PCB7 646 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 MPZL3Q6UWV2 235 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 C12orf56Q8IXR9 622 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 KIAA0895Q8NCT3 520 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 SCFD1Q8WVM8 642 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 TMEM40Q8WWA1 233 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 ZNF592Q92610 1267 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 BICD1Q96G01 975 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 TSPAN18Q96SJ8 248 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 TSG101Q99816 390 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 NAT10Q9H0A0 1025 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 CRISPLD1Q9H336 500 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 ELAC1Q9H777 363 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 KIAA1586Q9HCI6 787 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 SLC39A2Q9NP94 309 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 IL23AQ9NPF7 189 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 TYW1Q9NV66 732 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 PIN4Q9Y237 131 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 NOC2LQ9Y3T9 749 aaKnown RBP7.67□□□□□ -1.18
EPHA4-206ENST00000424339 STYXL1Q9Y6J8 313 aa7.67□□□□□ -1.18
EPHA4-206ENST00000424339 A0A0U1RQF3 1178 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CLDN3O15551 220 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CALUO43852 315 aaPredicted RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ZNF623O75123 536 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 FGFR1OPO95684 399 aaKnown RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 EOMESO95936 686 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MYBP10242 640 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MCF2P10911 925 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CSF2RAP15509 400 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ARF4P18085 180 aaPredicted RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 PROZP22891 400 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ERCC5P28715 1186 aaPredicted RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CD52P31358 61 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 CCL23P55773 120 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 NLRP12P59046 1061 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ENPEPQ07075 957 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MCL1Q07820 350 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 NOLC1Q14978 699 aaKnown RBP eCLIP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 TWF2Q6IBS0 349 aaKnown RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 SLC24A5Q71RS6 500 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 USP37Q86T82 979 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ADSSL1Q8N142 457 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 DBF4BQ8NFT6 615 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 PDLIM2Q96JY6 352 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 ACO2Q99798 780 aaKnown RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 TCHPQ9BT92 498 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 KIFC3Q9BVG8 833 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 TRIM6Q9C030 488 aaPredicted RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MINDY3Q9H8M7 445 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 AGO3Q9H9G7 860 aaKnown RBP7.66□□□□□ -1.18
EPHA4-206ENST00000424339 PTPRHQ9HD43 1115 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 UBN1Q9NPG3 1134 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 RGS18Q9NS28 235 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 KLF15Q9UIH9 416 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 TRAF3IP3Q9Y228 551 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 UMODL1Q5DID0 1318 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MICAL3Q7RTP6 2002 aa7.66□□□□□ -1.18
EPHA4-206ENST00000424339 MAPK13O15264 365 aa7.65□□□□□ -1.18
EPHA4-206ENST00000424339 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
EPHA4-206ENST00000424339 OGTO15294 1046 aa7.65□□□□□ -1.18
EPHA4-206ENST00000424339 PRPF6O94906 941 aaKnown RBP7.65□□□□□ -1.18
EPHA4-206ENST00000424339 FGBP02675 491 aa7.65□□□□□ -1.18
EPHA4-206ENST00000424339 STAG3L1P0CL83 205 aa7.65□□□□□ -1.18
EPHA4-206ENST00000424339 CCNE1P24864 410 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms