RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 C18orf25Q96B23 403 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-206ENST00000423161 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 SLC2A4RGQ9NR83 387 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 NUB1Q9Y5A7 615 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 VPS13AQ96RL7 3174 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 FAM186AA6NE01 2351 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 MEFVO15553 781 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 RPL9P32969 192 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 ROR1Q01973 937 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 CACNB1Q02641 598 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 ANGPT1Q15389 498 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 PABPC1LQ4VXU2 614 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 SEZ6Q53EL9 994 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 MTSS1LQ765P7 747 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 RPP25Q9BUL9 199 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 DNMT3BQ9UBC3 853 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 SMC3Q9UQE7 1217 aa20.2■□□□□ 0.82
SREBF1-206ENST00000423161 RIF1Q5UIP0 2472 aaKnown RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 PTPRZ1P23471 2315 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-206ENST00000423161 CFAP54Q96N23 3096 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 SYN3O14994 580 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 MATR3P43243 847 aaKnown RBP eCLIP20.19■□□□□ 0.82
SREBF1-206ENST00000423161 SLC8B1Q6J4K2 584 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 ZPBP2Q6X784 338 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 ASCL5Q7RTU5 278 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 FRMD5Q7Z6J6 570 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 LARSQ9P2J5 1176 aaKnown RBP20.19■□□□□ 0.82
SREBF1-206ENST00000423161 KCNH3Q9ULD8 1083 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 ANK1P16157 1881 aa20.19■□□□□ 0.82
SREBF1-206ENST00000423161 WDR27A2RRH5 827 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 PRR23AA6NEV1 266 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 H0YCG3 227 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 H7C4K7 107 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 CLDN3O15551 220 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 ELF1P32519 619 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 MCM4P33991 863 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 MCM2P49736 904 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 NCKAP1LP55160 1127 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 ARPP19P56211 112 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 MCL1Q07820 350 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 SLC10A6Q3KNW5 377 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 ARSHQ5FYA8 562 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 PHLDB3Q6NSJ2 640 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 ZNF461Q8TAF7 563 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 ING5Q8WYH8 240 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 BICD1Q96G01 975 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 AK8Q96MA6 479 aa20.18■□□□□ 0.82
SREBF1-206ENST00000423161 PRRG1O14668 218 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 SLC26A4O43511 780 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 ABLIM3O94929 683 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 LRG1P02750 347 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 RHOP08100 348 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 CXCL8P10145 99 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 GPC5P78333 572 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
SREBF1-206ENST00000423161 HAUS6Q7Z4H7 955 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 KXD1Q9BQD3 176 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
SREBF1-206ENST00000423161 MRPS23Q9Y3D9 190 aaKnown RBP20.17■□□□□ 0.82
SREBF1-206ENST00000423161 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-206ENST00000423161 COL4A3Q01955 1670 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 FANCMQ8IYD8 2048 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 ARHGEF37A1IGU5 675 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 TBC1D4O60343 1298 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 ATF2P15336 505 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 UBA7P41226 1012 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 MRPL58Q14197 206 aaKnown RBP20.16■□□□□ 0.82
SREBF1-206ENST00000423161 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
SREBF1-206ENST00000423161 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 GPBP1Q86WP2 473 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 NKD2Q969F2 451 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-206ENST00000423161 TBC1D32Q96NH3 1257 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 REEP2Q9BRK0 252 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 HAPLN2Q9GZV7 340 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 SIT1Q9Y3P8 196 aa20.16■□□□□ 0.82
SREBF1-206ENST00000423161 CACNA1IQ9P0X4 2223 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 DCNP07585 359 aaKnown RBP20.15■□□□□ 0.82
SREBF1-206ENST00000423161 CLTAP09496 248 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 PTPN2P17706 415 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 SLC5A9Q2M3M2 681 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 ZNF280DQ6N043 979 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 TCEAL8Q8IYN2 117 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 APPL2Q8NEU8 664 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 CYP4F11Q9HBI6 524 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 PATJQ8NI35 1801 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 MYO15AQ9UKN7 3530 aa20.15■□□□□ 0.82
SREBF1-206ENST00000423161 TTC26A0AVF1 554 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 K7ENM7 598 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 FAM13AO94988 1023 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 BMP15O95972 392 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms