RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ZNF512Q96ME7 567 aaPredicted RBP8.92□□□□□ -0.98
UBR4-206ENST00000419533 C17orf75Q9HAS0 396 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 CYP26A1O43174 497 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 EXTL3O43909 919 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 SRGAP2O75044 1071 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ACSL3O95573 720 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 OCRLQ01968 901 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ART3Q13508 389 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 PLA2G4FQ68DD2 849 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 SH3KBP1Q96B97 665 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ULK4Q96C45 1275 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 POLR3CQ9BUI4 534 aaPredicted RBP8.92□□□□□ -0.98
UBR4-206ENST00000419533 APEX2Q9UBZ4 518 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 TBC1D12O60347 775 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 KPNA6O60684 536 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 RPA1P27694 616 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ALDH1A3P47895 512 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 CLCN6P51797 869 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 VGLL4Q14135 290 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ZKSCAN8Q15776 578 aaPredicted RBP8.92□□□□□ -0.98
UBR4-206ENST00000419533 ANO4Q32M45 955 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 FBXO38Q6PIJ6 1188 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 GIPC2Q8TF65 315 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 TSSK1BQ9BXA7 367 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 GAKO14976 1311 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.987e-9■■■■□ 23.3
UBR4-206ENST00000419533 CRLF3Q8IUI8 442 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ARHGAP18Q8N392 663 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 NT5C1AQ9BXI3 368 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 NKRFO15226 690 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBR4-206ENST00000419533 SEC31AO94979 1220 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 CLTAP09496 248 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 THPOP40225 353 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 ALDH7A1P49419 539 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 PRMT2P55345 433 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 GTF2H3Q13889 308 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 EDRF1Q3B7T1 1238 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SDE2Q6IQ49 451 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 RASSF3Q86WH2 238 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 DCUN1D1Q96GG9 259 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 STK33Q9BYT3 514 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SNX24Q9Y343 169 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SCN11AQ9UI33 1791 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 THSD7AQ9UPZ6 1657 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 H7C4K7 107 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 STRNO43815 780 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NPTXRO95502 500 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SUPT20HL2P0C7V6 817 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NNTQ13423 1086 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 MAPRE1Q15691 268 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 MGAT5BQ3V5L5 792 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 LRP10Q7Z4F1 713 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 CNPY4Q8N129 248 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 LRRC71Q8N4P6 559 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 DAGLBQ8NCG7 672 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 GMCL1P1Q8NEA9 526 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SERPINI1Q99574 410 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 KIAA1683Q9H0B3 1180 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SARS2Q9NP81 518 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 MAD2L2Q9UI95 211 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NOVA2Q9UNW9 492 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 RHOBTB3O94955 611 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 NCF2P19878 526 aaPredicted RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 SLC8A1P32418 973 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 FMO5P49326 533 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 ACTR2P61160 394 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 COPS2P61201 443 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 LAMB3Q13751 1172 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 IMPG1Q17R60 797 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBR4-206ENST00000419533 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 PPP1R2P1Q96PQ5 205 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.91□□□□□ -0.981e-8■■□□□ 13.1
UBR4-206ENST00000419533 DNAJC17Q9NVM6 304 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 YDJCA8MPS7 323 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 KIF19Q2TAC6 998 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 PID1Q7Z2X4 250 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 PPWD1Q96BP3 646 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 CCDC124Q96CT7 223 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 SPDL1Q96EA4 605 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 EGFL8Q99944 293 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 TRIM15Q9C019 465 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 TRIM45Q9H8W5 580 aaPredicted RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 UBQLN1Q9UMX0 589 aaKnown RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 A0A087WUV0 522 aaPredicted RBP8.91□□□□□ -0.98
UBR4-206ENST00000419533 KRT14P02533 472 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 LRG1P02750 347 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 ODC1P11926 461 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 TAF6P49848 677 aa8.91□□□□□ -0.98
UBR4-206ENST00000419533 HNRNPH2P55795 449 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms