RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZNF571Q7Z3V5 609 aaPredicted RBP22.37■■□□□ 1.17
CASC3-203ENST00000418132 ELMO3Q96BJ8 720 aa22.37■■□□□ 1.17
CASC3-203ENST00000418132 TRPV6Q9H1D0 765 aa22.37■■□□□ 1.17
CASC3-203ENST00000418132 NXF3Q9H4D5 531 aaKnown RBP22.37■■□□□ 1.17
CASC3-203ENST00000418132 APOBEC3GQ9HC16 384 aaKnown RBP22.37■■□□□ 1.17
CASC3-203ENST00000418132 MYCP01106 439 aaPredicted RBP22.36■■□□□ 1.17
CASC3-203ENST00000418132 GTF2F1P35269 517 aaKnown RBP eCLIP22.36■■□□□ 1.173e-11■■■□□ 18.8
CASC3-203ENST00000418132 FBXO47Q5MNV8 452 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 FAM71AQ8IYT1 594 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 SNX27Q96L92 541 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 IMPG2Q9BZV3 1241 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 CHST12Q9NRB3 414 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 HES2Q9Y543 173 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 GPR182O15218 404 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 CDK7P50613 346 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 NOP14P78316 857 aaKnown RBP22.36■■□□□ 1.17
CASC3-203ENST00000418132 CYP27A1Q02318 531 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 TMEM132DQ14C87 1099 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 SPA17Q15506 151 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 SLC18A3Q16572 532 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 SGSM1Q2NKQ1 1148 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 SPOPLQ6IQ16 392 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 C1orf127Q8N9H9 656 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 JAKMIP2Q96AA8 810 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 AGO3Q9H9G7 860 aaKnown RBP22.36■■□□□ 1.17
CASC3-203ENST00000418132 DERAQ9Y315 318 aa22.36■■□□□ 1.17
CASC3-203ENST00000418132 A0A0U1RQJ8 604 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 YARSP54577 528 aaKnown RBP22.35■■□□□ 1.17
CASC3-203ENST00000418132 MYL6P60660 151 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 TRPC3Q13507 836 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 ALKAL1Q6UXT8 129 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 ZNF662Q6ZS27 426 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 CXorf38Q8TB03 319 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 ATRIPQ8WXE1 791 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 SYT11Q9BT88 431 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 ERVK-5Q9HDB9 667 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 SIX4Q9UIU6 781 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 NUB1Q9Y5A7 615 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 PAXBP1Q9Y5B6 917 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 SQORQ9Y6N5 450 aa22.35■■□□□ 1.17
CASC3-203ENST00000418132 A0A087X0T9 212 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 RECQL4O94761 1208 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 FAM228BP0C875 321 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 GFPT1Q06210 699 aaPredicted RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 NFX1Q12986 1120 aaKnown RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 ZNF618Q5T7W0 954 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 TWF2Q6IBS0 349 aaKnown RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 CTU1Q7Z7A3 348 aaKnown RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 ZNF592Q92610 1267 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 OSBPL7Q9BZF2 842 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 XYLT2Q9H1B5 865 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 ADAMTS1Q9UHI8 967 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 TRIP11Q15643 1979 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 TBXAS1P24557 533 aaPredicted RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 ARHGAP25P42331 645 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 CUL2Q13617 745 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 SMG8Q8ND04 991 aaKnown RBP22.34■■□□□ 1.17
CASC3-203ENST00000418132 OLIG1Q8TAK6 271 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 CNTN3Q9P232 1028 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 IPPQ9Y573 584 aa22.34■■□□□ 1.17
CASC3-203ENST00000418132 KIF2AO00139 706 aaPredicted RBP22.33■■□□□ 1.17
CASC3-203ENST00000418132 CKBP12277 381 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 LPIN1Q14693 890 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 USP38Q8NB14 1042 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 TAF4BQ92750 862 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 KIF12Q96FN5 646 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 ARID3AQ99856 593 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 LZTFL1Q9NQ48 299 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 PADI3Q9ULW8 664 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 PCDHA13Q9Y5I0 950 aa22.33■■□□□ 1.17
CASC3-203ENST00000418132 UMODL1Q5DID0 1318 aa22.33■■□□□ 1.16
CASC3-203ENST00000418132 GHRP10912 638 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 HSPA8P11142 646 aaKnown RBP22.32■■□□□ 1.16
CASC3-203ENST00000418132 VAV2P52735 878 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 BMS1Q14692 1282 aaKnown RBP22.32■■□□□ 1.16
CASC3-203ENST00000418132 ZBTB6Q15916 424 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 XKR4Q5GH76 650 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 VPS36Q86VN1 386 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.32■■□□□ 1.16
CASC3-203ENST00000418132 IFIH1Q9BYX4 1025 aaKnown RBP22.32■■□□□ 1.16
CASC3-203ENST00000418132 CXCL16Q9H2A7 254 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 RNF39Q9H2S5 420 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 TUBB4AP04350 444 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 AKAP5P24588 427 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 CD52P31358 61 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 USP8P40818 1118 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 ARHGAP29Q52LW3 1261 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 FBXO46Q6PJ61 603 aaPredicted RBP22.32■■□□□ 1.16
CASC3-203ENST00000418132 KIAA1328Q86T90 577 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 ZMAT2Q96NC0 199 aaKnown RBP22.32■■□□□ 1.16
CASC3-203ENST00000418132 TSPAN18Q96SJ8 248 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 ITGA11Q9UKX5 1188 aa22.32■■□□□ 1.16
CASC3-203ENST00000418132 PDCD11Q14690 1871 aaKnown RBP22.31■■□□□ 1.16
CASC3-203ENST00000418132 ITGB3P05106 788 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 ACO1P21399 889 aaKnown RBP22.31■■□□□ 1.16
CASC3-203ENST00000418132 PAK2Q13177 524 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 ZNF699Q32M78 642 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 SMYD5Q6GMV2 418 aa22.31■■□□□ 1.16
CASC3-203ENST00000418132 FAM126BQ8IXS8 530 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms