RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SEMA4GQ9NTN9 838 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 ANKEF1Q9NU02 776 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 POLIQ9UNA4 740 aa19.77■□□□□ 0.76
VCP-202ENST00000417448 NCAM2O15394 837 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 USO1O60763 962 aaKnown RBP19.76■□□□□ 0.75
VCP-202ENST00000417448 NR1I2O75469 434 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 HOXA9P31269 272 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 RARRES1P49788 294 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 CREMQ03060 361 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 LIN9Q5TKA1 542 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 PRR23CQ6ZRP0 262 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 EPSTI1Q96J88 318 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 CCDC43Q96MW1 224 aaKnown RBP19.76■□□□□ 0.75
VCP-202ENST00000417448 NACC1Q96RE7 527 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 JPH2Q9BR39 696 aaPredicted RBP19.76■□□□□ 0.75
VCP-202ENST00000417448 NXF3Q9H4D5 531 aaKnown RBP19.76■□□□□ 0.75
VCP-202ENST00000417448 DHX33Q9H6R0 707 aaKnown RBP19.76■□□□□ 0.75
VCP-202ENST00000417448 XPNPEP1Q9NQW7 623 aa19.76■□□□□ 0.75
VCP-202ENST00000417448 LRP3O75074 770 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 BMP15O95972 392 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 RETP07949 1114 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 PMLP29590 882 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 NASPP49321 788 aaPredicted RBP19.75■□□□□ 0.75
VCP-202ENST00000417448 EMC2Q15006 297 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 HAUS3Q68CZ6 603 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 PRR23BQ6ZRT6 265 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 RNF149Q8NC42 400 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 LINC00301Q8NCQ3 95 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 LNX1Q8TBB1 728 aaPredicted RBP19.75■□□□□ 0.75
VCP-202ENST00000417448 LRRC15Q8TF66 581 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 PSPC1Q8WXF1 523 aaKnown RBP19.75■□□□□ 0.75
VCP-202ENST00000417448 SLC7A3Q8WY07 619 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 CHRDQ9H2X0 955 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 GPRC5CQ9NQ84 441 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 DNMT3BQ9UBC3 853 aaKnown RBP19.75■□□□□ 0.75
VCP-202ENST00000417448 RAB23Q9ULC3 237 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 WDFY3Q8IZQ1 3526 aa19.75■□□□□ 0.75
VCP-202ENST00000417448 ERLIN2O94905 339 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 KCNA4P22459 653 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 AKAP5P24588 427 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 KARSQ15046 597 aaKnown RBP19.74■□□□□ 0.75
VCP-202ENST00000417448 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 CELF5Q8N6W0 485 aaKnown RBP19.74■□□□□ 0.75
VCP-202ENST00000417448 SLC7A14Q8TBB6 771 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 HASPINQ8TF76 798 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 PANK2Q9BZ23 570 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 BHMT2Q9H2M3 363 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 ANGPTL2Q9UKU9 493 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 NDRG2Q9UN36 371 aaKnown RBP19.74■□□□□ 0.75
VCP-202ENST00000417448 GIT1Q9Y2X7 761 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 SRPRBQ9Y5M8 271 aaKnown RBP19.74■□□□□ 0.75
VCP-202ENST00000417448 GREB1Q4ZG55 1949 aa19.74■□□□□ 0.75
VCP-202ENST00000417448 ARHGEF35A5YM69 484 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 SPTLC2O15270 562 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 TADA2AO75478 443 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 ECI2O75521 394 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 HOXB3P14651 431 aaPredicted RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 DDIT3P35638 169 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 LONP1P36776 959 aaKnown RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 RFC5P40937 340 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 UBA7P41226 1012 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 DHX8Q14562 1220 aaKnown RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 HSP90AA2PQ14568 343 aaPredicted RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 PSMD5Q16401 504 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 CSRP2Q16527 193 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 SLC5A9Q2M3M2 681 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 PADI6Q6TGC4 694 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 PIK3R5Q8WYR1 880 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 MTRQ99707 1265 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 KLK14Q9P0G3 267 aa19.73■□□□□ 0.75
VCP-202ENST00000417448 MRPS17Q9Y2R5 130 aaKnown RBP19.73■□□□□ 0.75
VCP-202ENST00000417448 SF3B1O75533 1304 aaKnown RBP eCLIP19.73■□□□□ 0.75
VCP-202ENST00000417448 FASNP49327 2511 aaKnown RBP19.72■□□□□ 0.75
VCP-202ENST00000417448 NRG2O14511 850 aaPredicted RBP19.72■□□□□ 0.75
VCP-202ENST00000417448 XYLBO75191 536 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 POU2F2P09086 479 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 XRCC6P12956 609 aaKnown RBP eCLIP19.72■□□□□ 0.75
VCP-202ENST00000417448 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
VCP-202ENST00000417448 NRLP54845 237 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 DMWDQ09019 674 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 GRIK3Q13003 919 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 AMHR2Q16671 573 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 TANGO2Q6ICL3 276 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 MAMSTRQ6ZN01 415 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 ASAP3Q8TDY4 903 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 CCDC51Q96ER9 411 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 MCRS1Q96EZ8 462 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 TTPALQ9BTX7 342 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 KCNH3Q9ULD8 1083 aa19.72■□□□□ 0.75
VCP-202ENST00000417448 ANKRD11Q6UB99 2663 aaPredicted RBP19.72■□□□□ 0.75
VCP-202ENST00000417448 PDCD11Q14690 1871 aaKnown RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 KIF4AO95239 1232 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 PDIA4P13667 645 aaKnown RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 PLCG1P19174 1290 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 FCARP24071 287 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 AXLP30530 894 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 RAD51AP2Q09MP3 1159 aa19.71■□□□□ 0.75
VCP-202ENST00000417448 SRSF5Q13243 272 aaKnown RBP19.71■□□□□ 0.75
VCP-202ENST00000417448 TMEM119Q4V9L6 283 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms