RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 PODXLO00592 558 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 HNRNPDLO14979 420 aaKnown RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 OGTO15294 1046 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 B3GAT3O94766 335 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 ADH1AP07327 375 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 SPATA31D3P0C874 917 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 MYBP10242 640 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 TKTP29401 623 aaKnown RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 HOXD13P35453 343 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 BRCC3P46736 316 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 LIG4P49917 911 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 SPATA31D4Q6ZUB0 917 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 GPR149Q86SP6 731 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 GLIS3Q8NEA6 775 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 BICD1Q96G01 975 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.92□□□□□ -0.5
A1CF-208ENST00000414883 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 CPSF3Q9UKF6 684 aaKnown RBP11.92□□□□□ -0.5
A1CF-208ENST00000414883 TSC2P49815 1807 aa11.92□□□□□ -0.5
A1CF-208ENST00000414883 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
A1CF-208ENST00000414883 DCXO43602 365 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 GPR37L1O60883 481 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 RFPL2O75678 378 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 GLUD1P00367 558 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 GAP43P17677 238 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 RPL9P32969 192 aaKnown RBP11.91□□□□□ -0.5
A1CF-208ENST00000414883 AARSP49588 968 aaKnown RBP eCLIP11.91□□□□□ -0.5
A1CF-208ENST00000414883 GUCY2FP51841 1108 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 SPAG1Q07617 926 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 EHHADHQ08426 723 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
A1CF-208ENST00000414883 MRPL58Q14197 206 aaKnown RBP11.91□□□□□ -0.5
A1CF-208ENST00000414883 PSMD5Q16401 504 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 PALB2Q86YC2 1186 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 HDAC7Q8WUI4 952 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 HVCN1Q96D96 273 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
A1CF-208ENST00000414883 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 NECTIN4Q96NY8 510 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 TRIM9Q9C026 710 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 TBC1D7Q9P0N9 293 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 MTRRQ9UBK8 725 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 FBXW11Q9UKB1 542 aa11.91□□□□□ -0.5
A1CF-208ENST00000414883 FAM86C2PA6NEL3 165 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 C2CD4DB7Z1M9 353 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 PPEF2O14830 753 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 N4BP1O75113 896 aaKnown RBP11.9□□□□□ -0.5
A1CF-208ENST00000414883 LRPAP1P30533 357 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 ABCD1P33897 745 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 MTHFRP42898 656 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 CLCN6P51797 869 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 WNT7BP56706 349 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
A1CF-208ENST00000414883 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 GLYCTKQ8IVS8 523 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
A1CF-208ENST00000414883 DHX58Q96C10 678 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 SUSD3Q96L08 255 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 LRFN3Q9BTN0 628 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 CUEDC2Q9H467 287 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 MRPL44Q9H9J2 332 aaKnown RBP11.9□□□□□ -0.5
A1CF-208ENST00000414883 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 RAPGEFL1Q9UHV5 662 aa11.9□□□□□ -0.5
A1CF-208ENST00000414883 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
A1CF-208ENST00000414883 NFICP08651 508 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 PYGBP11216 843 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 IDEP14735 1019 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 CYP3A5P20815 502 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
A1CF-208ENST00000414883 CASP1P29466 404 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
A1CF-208ENST00000414883 ACOT2P49753 483 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 CREMQ03060 361 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 RAB33AQ14088 237 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 KYAT1Q16773 422 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 ATAT1Q5SQI0 421 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 SPATA1Q5VX52 437 aa11.89□□□□□ -0.51
A1CF-208ENST00000414883 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms