RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 NPTX2P47972 431 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CLCN6P51797 869 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 NLRP11P59045 1033 aaKnown RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CENPCQ03188 943 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ARID5BQ14865 1188 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ZC2HC1CQ53FD0 456 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 TTI2Q6NXR4 508 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CCDC137Q6PK04 289 aaKnown RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 RUSC1Q9BVN2 902 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 NFU1Q9UMS0 254 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 LSM8O95777 96 aaKnown RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 KRT14P02533 472 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 PTPRAP18433 802 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ZNF507Q8TCN5 953 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 DHX35Q9H5Z1 703 aaKnown RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 TJP2Q9UDY2 1190 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 PDGFRAP16234 1089 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CUL2Q13617 745 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 DNAJC7Q99615 494 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 SP110Q9HB58 689 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 PHLPP1O60346 1717 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CABYRO75952 493 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 DDNO94850 711 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 SETSIPP0DME0 302 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 VDRP11473 427 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ITIH2P19823 946 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CCZ1BP86790 482 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 STAT4Q14765 748 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 E2F5Q15329 346 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-205ENST00000414879 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 POLD4Q9HCU8 107 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 FRMPD4Q14CM0 1322 aa12.64□□□□□ -0.39
PTPRF-205ENST00000414879 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 PDHXO00330 501 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 SEPT6Q14141 434 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 SLC35G2Q8TBE7 412 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 SNX24Q9Y343 169 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 NFASCO94856 1347 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 NFIBO00712 420 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 PMS2P54278 862 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 CATSPERGQ6ZRH7 1159 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 MTMR14Q8NCE2 650 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 UHMK1Q8TAS1 419 aaKnown RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 ATP6V1E2Q96A05 226 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 CDCA5Q96FF9 252 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 KANSL3Q9P2N6 904 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 MAPK13O15264 365 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 MSCO60682 206 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 PHF2O75151 1096 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 F9P00740 461 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 AKR1A1P14550 325 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 TPI1P60174 286 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 HPS3Q969F9 1004 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 ASB7Q9H672 318 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 STRCQ7RTU9 1775 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 CTIFO43310 598 aaKnown RBP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 GRIK1P39086 918 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 FXR1P51114 621 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPRF-205ENST00000414879 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 CARD9Q9H257 536 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 CATSPERBQ9H7T0 1116 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 VIPAS39Q9H9C1 493 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
PTPRF-205ENST00000414879 GYPCP04921 128 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 PRLRP16471 622 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 GNL1P36915 607 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 CDKAL1Q5VV42 579 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 CC2D1AQ6P1N0 951 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TRMT10CQ7L0Y3 403 aaKnown RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 SKA2Q8WVK7 121 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 PIDD1Q9HB75 910 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 A0A0A6YYK5 440 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 COPEO14579 308 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms