RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 BRAPQ7Z569 592 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 SLC44A3Q8N4M1 653 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 ZHX3Q9H4I2 956 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 BLOC1S4Q9NUP1 217 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 KCND2Q9NZV8 630 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
ACTB-202ENST00000414620 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
ACTB-202ENST00000414620 NUMBLQ9Y6R0 609 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 CLDN3O15551 220 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 PI15O43692 258 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 XYLBO75191 536 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 KRT18P05783 430 aaKnown RBP16.97■□□□□ 0.31
ACTB-202ENST00000414620 MCM4P33991 863 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 TNFSF9P41273 254 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 ROR1Q01973 937 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 HTR4Q13639 388 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 ZPBP2Q6X784 338 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 HAUS6Q7Z4H7 955 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 KCTD17Q8N5Z5 321 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 ITFG1Q8TB96 612 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 RAD54LQ92698 747 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.315e-8■□□□□ 10.5
ACTB-202ENST00000414620 KCNG1Q9UIX4 513 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 BACE2Q9Y5Z0 518 aa16.97■□□□□ 0.31
ACTB-202ENST00000414620 WDR27A2RRH5 827 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 KRBA1A5PL33 1030 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 STK25O00506 426 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 BMP15O95972 392 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 SRFP11831 508 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 RFX1P22670 979 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 HOXA9P31269 272 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 LIG4P49917 911 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 MCL1Q07820 350 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 CUL4AQ13619 759 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 GPR152Q8TDT2 470 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 ING5Q8WYH8 240 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 RPP25Q9BUL9 199 aaKnown RBP16.96■□□□□ 0.31
ACTB-202ENST00000414620 DNMT3BQ9UBC3 853 aaKnown RBP16.96■□□□□ 0.31
ACTB-202ENST00000414620 CDH7Q9ULB5 785 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 CLIC4Q9Y696 253 aa16.96■□□□□ 0.31
ACTB-202ENST00000414620 ANHXE9PGG2 379 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 H0YCG3 227 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 HNRNPDLO14979 420 aaKnown RBP16.95■□□□□ 0.3
ACTB-202ENST00000414620 SYN3O14994 580 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 SLC26A4O43511 780 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
ACTB-202ENST00000414620 LONP1P36776 959 aaKnown RBP16.95■□□□□ 0.3
ACTB-202ENST00000414620 CLCN5P51795 746 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 FAM173BQ6P4H8 233 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 PARM1Q6UWI2 310 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 FGF13Q92913 245 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 FGF14Q92915 247 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 KIF12Q96FN5 646 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 PARVGQ9HBI0 331 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
ACTB-202ENST00000414620 SCN1AP35498 2009 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 TRAK2O60296 914 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
ACTB-202ENST00000414620 AOC1P19801 751 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
ACTB-202ENST00000414620 NMT1P30419 496 aaKnown RBP16.94■□□□□ 0.3
ACTB-202ENST00000414620 ELF1P32519 619 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 NUBP1P53384 320 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 PPP2R3AQ06190 1150 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 PABPC1LQ4VXU2 614 aaKnown RBP16.94■□□□□ 0.3
ACTB-202ENST00000414620 SLC8B1Q6J4K2 584 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
ACTB-202ENST00000414620 DDX12PQ92771 950 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 EPSTI1Q96J88 318 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 WNT16Q9UBV4 365 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 FBXL5Q9UKA1 691 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 TBX20Q9UMR3 447 aa16.94■□□□□ 0.3
ACTB-202ENST00000414620 LACTBL1A8MY62 500 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 H7C4K7 107 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 PRRG1O14668 218 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 LRG1P02750 347 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 RHOP08100 348 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 CLTAP09496 248 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 ZNF131P52739 623 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
ACTB-202ENST00000414620 RESTQ13127 1097 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 PTPAQ15257 358 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 ZNF280DQ6N043 979 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 NPAS3Q8IXF0 933 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 ZNF461Q8TAF7 563 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 KXD1Q9BQD3 176 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 IRF2BPLQ9H1B7 796 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 TBC1D17Q9HA65 648 aa16.93■□□□□ 0.3
ACTB-202ENST00000414620 CYP4F11Q9HBI6 524 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms