RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
CDC42-204ENST00000411827 FAM193BQ96PV7 902 aaPredicted RBP20.14■□□□□ 0.81
CDC42-204ENST00000411827 ERGIC2Q96RQ1 377 aa20.14■□□□□ 0.81
CDC42-204ENST00000411827 POP1Q99575 1024 aaKnown RBP20.14■□□□□ 0.81
CDC42-204ENST00000411827 IFNKQ9P0W0 207 aa20.14■□□□□ 0.81
CDC42-204ENST00000411827 MEFVO15553 781 aaPredicted RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 STAU1O95793 577 aaKnown RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 LRPAP1P30533 357 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 RNASELQ05823 741 aaKnown RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 SGSM1Q2NKQ1 1148 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 CMTR2Q8IYT2 770 aaKnown RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 LRRC52Q8N7C0 313 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 HELQQ8TDG4 1101 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 ZNF516Q92618 1163 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 ZMAT2Q96NC0 199 aaKnown RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 CASD1Q96PB1 797 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 MTMR12Q9C0I1 747 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 FAM124BQ9H5Z6 455 aaPredicted RBP20.13■□□□□ 0.81
CDC42-204ENST00000411827 RNF19AQ9NV58 838 aa20.13■□□□□ 0.81
CDC42-204ENST00000411827 MEIS3P2A8K0S8 358 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 TULP1O00294 542 aaPredicted RBP20.12■□□□□ 0.81
CDC42-204ENST00000411827 GJB5O95377 273 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 FGFR1P11362 822 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 RFX1P22670 979 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 BMP8BP34820 402 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 SCNN1GP51170 649 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 EPHB4P54760 987 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 MYO1EQ12965 1108 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 NCOA4Q13772 614 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 WDR44Q5JSH3 913 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 OR5B17Q8NGF7 314 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 ZNF560Q96MR9 790 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 TMEM175Q9BSA9 504 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 RAB20Q9NX57 234 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 INPP5FQ9Y2H2 1132 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 INSL6Q9Y581 213 aa20.12■□□□□ 0.81
CDC42-204ENST00000411827 RANBP2P49792 3224 aaKnown RBP20.12■□□□□ 0.81
CDC42-204ENST00000411827 ANO9A1A5B4 782 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 ARHGEF37A1IGU5 675 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 UPP2O95045 317 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 P4HA1P13674 534 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 WNT7BP56706 349 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 DSC1Q08554 894 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 CBWD6Q4V339 395 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 CBWD3Q5JTY5 395 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 CBWD5Q5RIA9 395 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 TDRD10Q5VZ19 366 aaKnown RBP20.11■□□□□ 0.81
CDC42-204ENST00000411827 EHBP1Q8NDI1 1231 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 ZNF689Q96CS4 500 aaPredicted RBP20.11■□□□□ 0.81
CDC42-204ENST00000411827 NAP1L5Q96NT1 182 aaPredicted RBP20.11■□□□□ 0.81
CDC42-204ENST00000411827 RAD9AQ99638 391 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 GDF15Q99988 308 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 NUP58Q9BVL2 599 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
CDC42-204ENST00000411827 VRTNQ9H8Y1 702 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 PLCB1Q9NQ66 1216 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 TBC1D13Q9NVG8 400 aa20.11■□□□□ 0.81
CDC42-204ENST00000411827 PTPRJQ12913 1337 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 TBKBP1A7MCY6 615 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 POMCP01189 267 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
CDC42-204ENST00000411827 IBSPP21815 317 aaPredicted RBP20.1■□□□□ 0.81
CDC42-204ENST00000411827 PIK3CAP42336 1068 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 DEFB103AP81534 67 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 HTRA4P83105 476 aaPredicted RBP20.1■□□□□ 0.81
CDC42-204ENST00000411827 NAB2Q15742 525 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 EPC2Q52LR7 807 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 DCLRE1AQ6PJP8 1040 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 HERC6Q8IVU3 1022 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 C1orf127Q8N9H9 656 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 YME1L1Q96TA2 773 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 EDEM3Q9BZQ6 932 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 UBE2OQ9C0C9 1292 aaKnown RBP20.1■□□□□ 0.81
CDC42-204ENST00000411827 GCNT4Q9P109 453 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 STK39Q9UEW8 545 aa20.1■□□□□ 0.81
CDC42-204ENST00000411827 ITIH6Q6UXX5 1313 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 PIRO00625 290 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 HLA-DRAP01903 254 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 ALDH2P05091 517 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 ITGB3P05106 788 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 FAM163BP0C2L3 166 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 CDC25BP30305 580 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 ZNF75DP51815 510 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 GLRA4Q5JXX5 417 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 C9orf57Q5W0N0 161 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 ENOSF1Q7L5Y1 443 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.09■□□□□ 0.81
CDC42-204ENST00000411827 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 TTC39CQ8N584 583 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 TAS1R2Q8TE23 839 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 JAKMIP2Q96AA8 810 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 RNPC3Q96LT9 517 aaKnown RBP20.09■□□□□ 0.81
CDC42-204ENST00000411827 MMRN2Q9H8L6 949 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 AAASQ9NRG9 546 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 MIOSQ9NXC5 875 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 FBXL5Q9UKA1 691 aa20.09■□□□□ 0.81
CDC42-204ENST00000411827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDC42-204ENST00000411827 ANK1P16157 1881 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms