RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SMARCB1Q12824 385 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 CUL4AQ13619 759 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 NAB2Q15742 525 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 PABPC1LQ4VXU2 614 aaKnown RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 GLRA4Q5JXX5 417 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 ARMCX5Q6P1M9 558 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 PRSS55Q6UWB4 352 aaPredicted RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 ALKAL1Q6UXT8 129 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 RSPO2Q6UXX9 243 aaPredicted RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 SV2BQ7L1I2 683 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 DAW1Q8N136 415 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 RAD54LQ92698 747 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 ATOH1Q92858 354 aaPredicted RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 E2F7Q96AV8 911 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 SUSD3Q96L08 255 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 NELL2Q99435 816 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 CLSTN3Q9BQT9 956 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 MMTAG2Q9BU76 263 aaKnown RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 ASB7Q9H672 318 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 AVENQ9NQS1 362 aaPredicted RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 TBX20Q9UMR3 447 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
SNORD88B-201ENST00000408454 PCDHB13Q9Y5F0 798 aa14□□□□□ -0.17
SNORD88B-201ENST00000408454 OR6C75A6NL08 312 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 RFPL2O75678 378 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 ASGR2P07307 311 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 ODC1P11926 461 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 CPB1P15086 417 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 ATF2P15336 505 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 AOC1P19801 751 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 CDC25AP30304 524 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 MRE11P49959 708 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 ZNF131P52739 623 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 MAPK7Q13164 816 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 CTXN3Q4LDR2 81 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 VARS2Q5ST30 1063 aaKnown RBP13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 METTL23Q86XA0 190 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 TCEAL8Q8IYN2 117 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 FLCNQ8NFG4 579 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 KIF12Q96FN5 646 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 REEP2Q9BRK0 252 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 MSTO1Q9BUK6 570 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 CUEDC2Q9H467 287 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 ST6GALNAC4Q9H4F1 302 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 SLC2A4RGQ9NR83 387 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 RAPGEFL1Q9UHV5 662 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 MRPS23Q9Y3D9 190 aaKnown RBP13.99□□□□□ -0.17
SNORD88B-201ENST00000408454 IL18RAPO95256 599 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PLCG1P19174 1290 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 LRPAP1P30533 357 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PNPLA4P41247 253 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PRKCQQ04759 706 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 RAD51AP2Q09MP3 1159 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PPP2R5DQ14738 602 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PDZD4Q76G19 769 aaPredicted RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 GRASPQ7Z6J2 395 aaPredicted RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 MAP4K3Q8IVH8 894 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 ZNF512Q96ME7 567 aaPredicted RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 ZNF560Q96MR9 790 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PNMA5Q96PV4 448 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 PAAF1Q9BRP4 392 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 HSFX1Q9UBD0 423 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 REV3LO60673 3130 aa13.98□□□□□ -0.17
SNORD88B-201ENST00000408454 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 SFI1A8K8P3 1242 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 RBAK-RBAKDNI3L0D1 243 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 K7ELQ4 463 aaPredicted RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 SPATA31D3P0C874 917 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 TYMPP19971 482 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 TKTP29401 623 aaKnown RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 STAT6P42226 847 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 GTF2BQ00403 316 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 VEPH1Q14D04 833 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 IL17AQ16552 155 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 SPATA31D4Q6ZUB0 917 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 ITIH5Q86UX2 942 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 HSCBQ8IWL3 235 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 CCDC65Q8IXS2 484 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 SIX5Q8N196 739 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 THEM5Q8N1Q8 247 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 SLC44A3Q8N4M1 653 aa13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 C2orf15Q8WU43 125 aaKnown RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 CACTINQ8WUQ7 758 aaKnown RBP13.97□□□□□ -0.17
SNORD88B-201ENST00000408454 MSANTD3Q96H12 275 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms