RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SH3GL3Q99963 347 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 HSD17B14Q9BPX1 270 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CCDC77Q9BR77 488 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 C11orf70Q9BRQ4 267 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 CYP39A1Q9NYL5 469 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 MYH11P35749 1972 aa10.17□□□□□ -0.78
SMC1B-202ENST00000404354 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 GYS1P13807 737 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 TCF4P15884 667 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ITIH2P19823 946 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ADRA1DP25100 572 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 PEX3P56589 373 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 KPNB1Q14974 876 aaKnown RBP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 SPDYCQ5MJ68 293 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ANKRD35Q8N283 1001 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 CD101Q93033 1021 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 KIAA1586Q9HCI6 787 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 OLFML3Q9NRN5 406 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ADRB2P07550 413 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 KRT4P19013 534 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 CALRP27797 417 aaKnown RBP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ALDH3A1P30838 453 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 SP4Q02446 784 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 BMT2Q1RMZ1 405 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 NLRP9Q7RTR0 991 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 CROCCP2Q86T23 111 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 TTC7BQ86TV6 843 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 TMEM109Q9BVC6 243 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 NMRK1Q9NWW6 199 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 CCNL1Q9UK58 526 aaPredicted RBP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 USH1CQ9Y6N9 552 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 NDUFB10O96000 172 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 GAP43P17677 238 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 GNAZP19086 355 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 PAPOLAP51003 745 aaKnown RBP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 TAS2R40P59535 323 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 JAG1P78504 1218 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 OTOAQ7RTW8 1153 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 LRRC6Q86X45 466 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 CCDC125Q86Z20 511 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 DAW1Q8N136 415 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 SMC6Q96SB8 1091 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 MIPEPQ99797 713 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 DCLK3Q9C098 648 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 HSPBP1Q9NZL4 362 aa10.16□□□□□ -0.78
SMC1B-202ENST00000404354 NOCTQ9UK39 431 aaKnown RBP10.16□□□□□ -0.78
SMC1B-202ENST00000404354 IGKV6D-41A0A0C4DH26 115 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 A6NHS1 94 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 CAPN9O14815 690 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 LUC7L3O95232 432 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 CCNB1P14635 433 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 ANXA13P27216 316 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SSTR1P30872 391 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 ECE1P42892 770 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 NRLP54845 237 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 KLC1Q07866 573 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 GPS1Q13098 491 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SPARCL1Q14515 664 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 MAPK6Q16659 721 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SPOPLQ6IQ16 392 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 RHBDF2Q6PJF5 856 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 FAM43BQ6ZT52 329 aaPredicted RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 VPS52Q8N1B4 723 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SLC25A41Q8N5S1 370 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 PSPC1Q8WXF1 523 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 UNC45AQ9H3U1 944 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 LRRC19Q9H756 370 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 DBNDD1Q9H9R9 158 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 NEU2Q9Y3R4 380 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 LAMB1P07942 1786 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SCN7AQ01118 1682 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 DDX60LQ5H9U9 1706 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 CYP3A7-CYP3A51PA0A087WV96 503 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 CYP3A7P24462 503 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 CDR2Q01850 454 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 RBBP5Q15291 538 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 C1orf220Q5T0J3 134 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 SYDE2Q5VT97 1194 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 RNF43Q68DV7 783 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 PPP1R21Q6ZMI0 780 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 EGFL6Q8IUX8 553 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 WDR60Q8WVS4 1066 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 FAM20AQ96MK3 541 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 MAK16Q9BXY0 300 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 ARL8BQ9NVJ2 186 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 WHRNQ9P202 907 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 HEY2Q9UBP5 337 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 G3BP2Q9UN86 482 aaKnown RBP10.15□□□□□ -0.78
SMC1B-202ENST00000404354 WASF2Q9Y6W5 498 aa10.15□□□□□ -0.78
SMC1B-202ENST00000404354 NVLO15381 856 aaKnown RBP10.15□□□□□ -0.79
SMC1B-202ENST00000404354 BAG2O95816 211 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 GH2P01242 217 aa10.15□□□□□ -0.79
SMC1B-202ENST00000404354 SMAD1Q15797 465 aaKnown RBP10.15□□□□□ -0.79
SMC1B-202ENST00000404354 TSNAXIP1Q2TAA8 658 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms