RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SLC16A4O15374 487 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 CLDN3O15551 220 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 VAMP7P51809 220 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 PSMC1P62191 440 aaKnown RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TNFAIP2Q03169 654 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SLC29A2Q14542 456 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 QRICH1Q2TAL8 776 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 CEP55Q53EZ4 464 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SZRD1Q7Z422 152 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 RHOT1Q8IXI2 618 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ELMOD1Q8N336 334 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SLC35G2Q8TBE7 412 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 DIABLOQ9NR28 239 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 DUSP10Q9Y6W6 482 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 C16orf96A6NNT2 1141 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ASAP2O43150 1006 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 GNAT1P11488 350 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TCF3P15923 654 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 IL10P22301 178 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 PRAMEP78395 509 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TRADDQ15628 312 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TRIP10Q15642 601 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 TADA1Q96BN2 335 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 PPP1R16BQ96T49 567 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ATP6V0A4Q9HBG4 840 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 KLHL8Q9P2G9 620 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 STAP1Q9ULZ2 295 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 AP3B1O00203 1094 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 AKR1B1P15121 316 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 COPB2P35606 906 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 HSD17B3P37058 310 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 MRPS35P82673 323 aaKnown RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 GPR162Q16538 588 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 CCDC92Q53HC0 331 aaPredicted RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SNRNP27Q8WVK2 155 aaKnown RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 ALKBH8Q96BT7 664 aaKnown RBP9.34□□□□□ -0.91
PTPRM-202ENST00000400053 IFT43Q96FT9 208 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 FAM213AQ9BRX8 229 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 SELENONQ9NZV5 590 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 PITPNM2Q9BZ72 1349 aa9.34□□□□□ -0.91
PTPRM-202ENST00000400053 B2RBV5 119 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 CALB1P05937 261 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 MMP10P09238 476 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 FGFR2P21802 821 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 TYK2P29597 1187 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 CPA2P48052 419 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 ATXN3P54252 364 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 CACNB3P54284 484 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 MRPS15P82914 257 aaKnown RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 C16orf72Q14CZ0 275 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 KLHL11Q9NVR0 708 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 BLOC1S6Q9UL45 172 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 PDS5AQ29RF7 1337 aaKnown RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 EMSYQ7Z589 1322 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 FAM47DPA6NHR8 397 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 SKAP2O75563 359 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 MARK3P27448 753 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 KRT72Q14CN4 511 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 HIF1AQ16665 826 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 PPP4R4Q6NUP7 873 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 PDXDC2PQ6P474 469 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 EEPD1Q7L9B9 569 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 PPP1R36Q96LQ0 422 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 FAM118BQ9BPY3 351 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 TSSK1BQ9BXA7 367 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 FSD1LQ9BXM9 530 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 DDX28Q9NUL7 540 aaKnown RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 TMEM51Q9NW97 253 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 MTMR4Q9NYA4 1195 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 BFARQ9NZS9 450 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 SENP1Q9P0U3 644 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 SLC9A2Q9UBY0 812 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 F5H6K3 240 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 NEMP1O14524 444 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 CYP26A1O43174 497 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 ERVK-24P63145 666 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 KLRC3Q07444 240 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 LBRQ14739 615 aaKnown RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 NTRK3Q16288 839 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 NAIF1Q69YI7 327 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
PTPRM-202ENST00000400053 ANKS1AQ92625 1134 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 ABHD8Q96I13 439 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
PTPRM-202ENST00000400053 AGPAT1Q99943 283 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms