RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PYM1Q9BRP8 204 aaKnown RBP18.19■□□□□ 0.5
APTR-201ENST00000398043 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
APTR-201ENST00000398043 SCAND2PQ9GZW5 306 aaPredicted RBP18.19■□□□□ 0.5
APTR-201ENST00000398043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
APTR-201ENST00000398043 TUBGCP4Q9UGJ1 667 aa18.19■□□□□ 0.5
APTR-201ENST00000398043 SERTAD1Q9UHV2 236 aa18.19■□□□□ 0.5
APTR-201ENST00000398043 PCDHB13Q9Y5F0 798 aa18.19■□□□□ 0.5
APTR-201ENST00000398043 ADH1AP07327 375 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 CYP3A5P20815 502 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 LRPAP1P30533 357 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 BRCC3P46736 316 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 ACOT2P49753 483 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 ASIC1P78348 528 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 SPAG1Q07617 926 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 KIAA1841Q6NSI8 718 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 KANK3Q6NY19 840 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
APTR-201ENST00000398043 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 ZSWIM2Q8NEG5 633 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 KHSRPQ92945 711 aaKnown RBP eCLIP18.18■□□□□ 0.5
APTR-201ENST00000398043 FBXL18Q96ME1 805 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 CLSTN3Q9BQT9 956 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 BLZF1Q9H2G9 400 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 ADAM7Q9H2U9 754 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 RPF1Q9H9Y2 349 aaKnown RBP18.18■□□□□ 0.5
APTR-201ENST00000398043 DZANK1Q9NVP4 752 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 AGO2Q9UKV8 859 aaKnown RBP18.18■□□□□ 0.5
APTR-201ENST00000398043 EXOC7Q9UPT5 735 aa18.18■□□□□ 0.5
APTR-201ENST00000398043 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 A0A1W2PQ27 194 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 A0A1W2PQ64 194 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 A0A1W2PQD8 194 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 KLRC4O43908 158 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
APTR-201ENST00000398043 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
APTR-201ENST00000398043 NUCB2P80303 420 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 ITIH3Q06033 890 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 CUL4BQ13620 913 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 POSTNQ15063 836 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 CD302Q8IX05 232 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 GJD3Q8N144 294 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
APTR-201ENST00000398043 ZNF507Q8TCN5 953 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 KIF12Q96FN5 646 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 APOL5Q9BWW9 433 aa18.17■□□□□ 0.5
APTR-201ENST00000398043 I3L4J1 428 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
APTR-201ENST00000398043 GARTP22102 1010 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 TKTP29401 623 aaKnown RBP18.16■□□□□ 0.5
APTR-201ENST00000398043 AFMP43652 599 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 NDUFA8P51970 172 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 WNT7BP56706 349 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 CREMQ03060 361 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 CBX2Q14781 532 aaPredicted RBP18.16■□□□□ 0.5
APTR-201ENST00000398043 FAM26FQ5R3K3 315 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 JADE1Q6IE81 842 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 POMGNT1Q8WZA1 660 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 PAGE5Q96GU1 130 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 PHF7Q9BWX1 381 aaPredicted RBP18.16■□□□□ 0.5
APTR-201ENST00000398043 GOLPH3LQ9H4A5 285 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 ASB7Q9H672 318 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 TMEM206Q9H813 350 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 USP25Q9UHP3 1055 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 UBQLN1Q9UMX0 589 aaKnown RBP18.16■□□□□ 0.5
APTR-201ENST00000398043 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.16■□□□□ 0.5
APTR-201ENST00000398043 TRIOO75962 3097 aa18.16■□□□□ 0.5
APTR-201ENST00000398043 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 ADAM12O43184 909 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 TGM5O43548 720 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 TBC1D4O60343 1298 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 NFICP08651 508 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
APTR-201ENST00000398043 GUCY2FP51841 1108 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 MRPL58Q14197 206 aaKnown RBP18.15■□□□□ 0.5
APTR-201ENST00000398043 PSMD5Q16401 504 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 RARS2Q5T160 578 aaKnown RBP18.15■□□□□ 0.5
APTR-201ENST00000398043 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 RSPO2Q6UXX9 243 aaPredicted RBP18.15■□□□□ 0.5
APTR-201ENST00000398043 HDAC7Q8WUI4 952 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 SUSD3Q96L08 255 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 SFXN1Q9H9B4 322 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 MTRRQ9UBK8 725 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 DERAQ9Y315 318 aa18.15■□□□□ 0.5
APTR-201ENST00000398043 TGFB1I1O43294 461 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 GLUD1P00367 558 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 PDXDC1Q6P996 788 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 GPR149Q86SP6 731 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 PALB2Q86YC2 1186 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
APTR-201ENST00000398043 CMASQ8NFW8 434 aaPredicted RBP18.14■□□□□ 0.49
APTR-201ENST00000398043 SCFD1Q8WVM8 642 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms