RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 WDR44Q5JSH3 913 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 AGBL2Q5U5Z8 902 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CRELD2Q6UXH1 353 aaPredicted RBP19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 PASD1Q8IV76 773 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 MCOLN2Q8IZK6 566 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 MYCBPAPQ8TBZ2 947 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ZNF473Q8WTR7 871 aaKnown RBP19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 FZD9O00144 591 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 C4BPAP04003 597 aaKnown RBP19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 SNX1Q13596 522 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 NEDD9Q14511 834 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 SLC29A2Q14542 456 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 PSMD6Q15008 389 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 SCARA3Q6AZY7 606 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ENOSF1Q7L5Y1 443 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CYFIP2Q96F07 1278 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TARS2Q9BW92 718 aaKnown RBP19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 MROH7Q68CQ1 1323 aa19.59■□□□□ 0.73
CHRFAM7A-202ENST00000397827 TLDC2A0PJX2 215 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 ATP2A1O14983 1001 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 VNN1O95497 513 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 EDN1P05305 212 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 CYP1B1Q16678 543 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 FAXDC2Q96IV6 333 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 GGA3Q9NZ52 723 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 PCDHB2Q9Y5E7 798 aa19.58■□□□□ 0.73
CHRFAM7A-202ENST00000397827 K7ERI5 159 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ZC3H11AO75152 810 aaKnown RBP eCLIP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 OATP04181 439 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HARSP12081 509 aaKnown RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FGFR4P22455 802 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CALRP27797 417 aaKnown RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 STXBP2Q15833 593 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NAIF1Q69YI7 327 aaPredicted RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DLK2Q6UY11 383 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ANKRD35Q8N283 1001 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DEPTORQ8TB45 409 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 N4BP2L2Q92802 583 aaPredicted RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 APOBEC3GQ9HC16 384 aaKnown RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 RBAKQ9NYW8 714 aaPredicted RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FBXO40Q9UH90 709 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MAFBQ9Y5Q3 323 aaPredicted RBP19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CAPN7Q9Y6W3 813 aa19.58■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PAX7P23759 505 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CLDN10P78369 228 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DENND2CQ68D51 928 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ATG4AQ8WYN0 398 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CABS1Q96KC9 395 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HERPUD2Q9BSE4 406 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PORCNQ9H237 461 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CD248Q9HCU0 757 aa19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 EIF3BP55884 814 aaKnown RBP19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TACO1Q9BSH4 297 aaKnown RBP19.57■□□□□ 0.72
CHRFAM7A-202ENST00000397827 LCTP09848 1927 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 H0YCG3 227 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 O00370 1275 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 STAM2O75886 525 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 RDXP35241 583 aaKnown RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NSFP46459 744 aaKnown RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PPP1R7Q15435 360 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SGO2Q562F6 1265 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TMEM270Q6UE05 265 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MDM1Q8TC05 714 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DHX33Q9H6R0 707 aaKnown RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 KIAA1586Q9HCI6 787 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 AFG3L2Q9Y4W6 797 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 UMODL1Q5DID0 1318 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 H0YHG0 523 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NUDT17P0C025 328 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 IBSPP21815 317 aaPredicted RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CCDC25Q86WR0 208 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 C11orf70Q9BRQ4 267 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MSTO1Q9BUK6 570 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CHST7Q9NS84 486 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MTRF1LQ9UGC7 380 aaKnown RBP19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 STYXL1Q9Y6J8 313 aa19.56■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ECEL1O95672 775 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FAM107AO95990 144 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ACO1P21399 889 aaKnown RBP19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SPDYCQ5MJ68 293 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 OR5B17Q8NGF7 314 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 BRCA1P38398 1863 aaKnown RBP19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PASKQ96RG2 1323 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TTLL13PA6NNM8 815 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DRP2Q13474 957 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TREML2Q5T2D2 321 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 B4GALNT4Q76KP1 1039 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 LRRC19Q9H756 370 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MCM8Q9UJA3 840 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PCDHB4Q9Y5E5 795 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FSCN2O14926 492 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ATG7O95352 703 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NF2P35240 595 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ARL2P36404 184 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NAMPTP43490 491 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FNTAP49354 379 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms