RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 BRCC3P46736 316 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 GRM2Q14416 872 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 FAM78AQ5JUQ0 283 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 ANKS3Q6ZW76 656 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 TCEAL4Q96EI5 215 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 ADPGKQ9BRR6 497 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 KIFC3Q9BVG8 833 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
CUX2-202ENST00000397643 NAMPTP43490 491 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
CUX2-202ENST00000397643 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 DCAF4L1Q3SXM0 396 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 ZNF461Q8TAF7 563 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 UROC1Q96N76 676 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 TUFT1Q9NNX1 390 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 GMEB2Q9UKD1 530 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 NDRG2Q9UN36 371 aaKnown RBP17.72■□□□□ 0.43
CUX2-202ENST00000397643 TICRRQ7Z2Z1 1910 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 NCANO14594 1321 aa17.72■□□□□ 0.43
CUX2-202ENST00000397643 BTBD18B2RXH4 712 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 ADRB1P08588 477 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 PTPN2P17706 415 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 CYP11B2P19099 503 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 LPAL2Q16609 132 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 NT5DC1Q5TFE4 455 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 MAP4K3Q8IVH8 894 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 ASB16Q96NS5 453 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 CORO1BQ9BR76 489 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 ZFP14Q9HCL3 533 aa17.71■□□□□ 0.43
CUX2-202ENST00000397643 CFAP47Q6ZTR5 3102 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 MAN2B1O00754 1011 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 MOSPD3O75425 235 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 MICAL2O94851 1124 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 SEC24AO95486 1093 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 LRG1P02750 347 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 LIG1P18858 919 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 SPEM2Q0P670 501 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 GAS6Q14393 721 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 VITQ6UXI7 678 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 TCEAL8Q8IYN2 117 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 CEP120Q8N960 986 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 WASF1Q92558 559 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 ZSWIM3Q96MP5 696 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 IER2Q9BTL4 223 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 POLR3CQ9BUI4 534 aaPredicted RBP17.7■□□□□ 0.42
CUX2-202ENST00000397643 BRD9Q9H8M2 597 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 ZNF334Q9HCZ1 680 aaPredicted RBP17.7■□□□□ 0.42
CUX2-202ENST00000397643 TRPV5Q9NQA5 729 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.7■□□□□ 0.42
CUX2-202ENST00000397643 CHD6Q8TD26 2715 aa17.7■□□□□ 0.42
CUX2-202ENST00000397643 SMIM28A0A1B0GU29 152 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 ARNTLO00327 626 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 TRAPPC3O43617 180 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 ATF2P15336 505 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 MRPL58Q14197 206 aaKnown RBP17.69■□□□□ 0.42
CUX2-202ENST00000397643 ATF7IP2Q5U623 682 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 LAIR1Q6GTX8 287 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 ALKAL1Q6UXT8 129 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
CUX2-202ENST00000397643 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
CUX2-202ENST00000397643 NACC1Q96RE7 527 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 TRMT61BQ9BVS5 477 aaKnown RBP17.69■□□□□ 0.42
CUX2-202ENST00000397643 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
CUX2-202ENST00000397643 CNOT1A5YKK6 2376 aaKnown RBP17.69■□□□□ 0.42
CUX2-202ENST00000397643 PRRG1O14668 218 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 SLC30A4O14863 429 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 CHRNB1P11230 501 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 CCR3P51677 355 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 NRLP54845 237 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 CELF5Q8N6W0 485 aaKnown RBP17.68■□□□□ 0.42
CUX2-202ENST00000397643 SMARCD2Q92925 531 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 IRF7Q92985 503 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 LMAN1LQ9HAT1 526 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 CYP4F11Q9HBI6 524 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 PIAS3Q9Y6X2 628 aa17.68■□□□□ 0.42
CUX2-202ENST00000397643 PODXLO00592 558 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 ZNF197O14709 1029 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 SYN3O14994 580 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
CUX2-202ENST00000397643 LRP3O75074 770 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 LARGE1O95461 756 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 RETP07949 1114 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 PSMC3P17980 439 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 RPA1P27694 616 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 GDI1P31150 447 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 ELF1P32519 619 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 GRM5P41594 1212 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 EFNA5P52803 228 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 EPHA5P54756 1037 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 SATB1Q01826 763 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 DMWDQ09019 674 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 PPP2R5AQ15172 486 aa17.67■□□□□ 0.42
CUX2-202ENST00000397643 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms