RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 MDM1Q8TC05 714 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 RAB20Q9NX57 234 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 EXOC1LA0A1B0GW35 172 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 OPLAHO14841 1288 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CAPN15O75808 1086 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 IL1BP01584 269 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 FGFR4P22455 802 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 GPSM2P81274 684 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CCNG2Q16589 344 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ACBD5Q5T8D3 534 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SRRM1Q8IYB3 904 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 JDP2Q8WYK2 163 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 LPAR1Q92633 364 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CD101Q93033 1021 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 GJA10Q969M2 543 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CHCHD3Q9NX63 227 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NDE1Q9NXR1 346 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SLC12A4Q9UP95 1085 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SHOC2Q9UQ13 582 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 LIN7AO14910 233 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TTI1O43156 1089 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 POLR2MP0CAP2 368 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 JAK3P52333 1124 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SGO2Q562F6 1265 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ZDHHC24Q6UX98 284 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 OGFOD1Q8N543 542 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ATL2Q8NHH9 583 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 B4GALNT2Q8NHY0 566 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ATP8B4Q8TF62 1192 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NT5C1BQ96P26 610 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TEKT3Q9BXF9 490 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MRPL47Q9HD33 250 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SRP68Q9UHB9 627 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SLC24A2Q9UI40 661 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP15Q9Y4E8 981 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TCP11X1B4DZS4 312 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TBC1D12O60347 775 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CYP1A2P05177 515 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 YWHAGP61981 247 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 GTF2IP78347 998 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MRPS35P82673 323 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TRPM8Q7Z2W7 1104 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 LRRC47Q8N1G4 583 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 FBXL13Q8NEE6 735 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 PPP4R1Q8TF05 950 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NLRP7Q8WX94 980 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NKD2Q969F2 451 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 EIF2AK1Q9BQI3 630 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TRIM51Q9BSJ1 452 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 TRAIPQ9BWF2 469 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NOCTQ9UK39 431 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MYH14Q7Z406 1995 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ZSCAN5CA6NGD5 496 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 SLITRK3O94933 977 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 GJB6O95452 261 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 SERPINB3P29508 390 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CCNG1P51959 295 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 AUHQ13825 339 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 KAZNQ674X7 775 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FAM196AQ6ZSG2 479 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FAM83AQ86UY5 434 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 MAP4K3Q8IVH8 894 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 LNX1Q8TBB1 728 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RAPGEF5Q92565 580 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 INPP5DQ92835 1189 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CNKSR1Q969H4 720 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CFAP69A5D8W1 941 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 KRT10P13645 584 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CA8P35219 290 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF211Q13398 564 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ABCB5Q2M3G0 1257 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CDC42EP5Q6NZY7 148 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ACSBG1Q96GR2 724 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PACSIN1Q9BY11 444 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF518BQ9C0D4 1074 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 EPB41L4BQ9H329 900 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PAPOLBQ9NRJ5 636 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CNTN6Q9UQ52 1028 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CHMP2BQ9UQN3 213 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ITGB4P16144 1822 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF189O75820 626 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 COPS2P61201 443 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PTK6Q13882 451 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 KRT80Q6KB66 452 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 LCA5Q86VQ0 697 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FAM151AQ8WW52 585 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 LRRC37BQ96QE4 947 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CPVLQ9H3G5 476 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 EBF2Q9HAK2 575 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 DRG1Q9Y295 367 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 SPAG6O75602 509 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ITGA4P13612 1032 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PTPN7P35236 360 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 GPC3P51654 580 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PSMC1P62191 440 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 MYL7Q01449 175 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms