RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ABI1Q8IZP0 508 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 ZNF397Q8NF99 534 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 LPPQ93052 612 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 NT5C1BQ96P26 610 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 FAM207AQ9NSI2 230 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 DPP3Q9NY33 737 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 CEP72Q9P209 647 aa25.4■■□□□ 1.66
TSPAN4-202ENST00000397396 SLC9A1P19634 815 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 RBP5P82980 135 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 SGSM1Q2NKQ1 1148 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 SMYD5Q6GMV2 418 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 PSRC1Q6PGN9 363 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 CNGA4Q8IV77 575 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 FMNL3Q8IVF7 1028 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 C1orf127Q8N9H9 656 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 SPC24Q8NBT2 197 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 FAXDC2Q96IV6 333 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 ZMAT2Q96NC0 199 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 PPP1R10Q96QC0 940 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 APEX2Q9UBZ4 518 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 DNAH12Q6ZR08 3092 aa25.39■■□□□ 1.66
TSPAN4-202ENST00000397396 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 PTGESO14684 152 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 AMHP03971 560 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 IBSPP21815 317 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 GLRA4Q5JXX5 417 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 KLHDC7AQ5VTJ3 777 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 CACNA2D4Q7Z3S7 1137 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 LMO3Q8TAP4 145 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 ZFP42Q96MM3 310 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 NUCKS1Q9H1E3 243 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 PDCD11Q14690 1871 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 MICAL3Q7RTP6 2002 aa25.38■■□□□ 1.65
TSPAN4-202ENST00000397396 MEIS3P2A8K0S8 358 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 OFD1O75665 1012 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 VNN1O95497 513 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 STAU1O95793 577 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 ITGB3P05106 788 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 PTMAP06454 111 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 KRT19P08727 400 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 PNPLA4P41247 253 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 MYO1EQ12965 1108 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 TBX2Q13207 712 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 ENOSF1Q7L5Y1 443 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 LRRC52Q8N7C0 313 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 DPF3Q92784 378 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 BADQ92934 168 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 ZNF560Q96MR9 790 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 UROC1Q96N76 676 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 LBHD1Q9BQE6 289 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 MRPL9Q9BYD2 267 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 TTYH3Q9C0H2 523 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 NR2E3Q9Y5X4 410 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 LTBP2Q14767 1821 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 TET1Q8NFU7 2136 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 CLSTN1O94985 981 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 ASS1P00966 412 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 P4HA1P13674 534 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 UCHL3P15374 230 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 LRPAP1P30533 357 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 KLK7P49862 253 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 SCNN1GP51170 649 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 PTPN21Q16825 1174 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 TCTN1Q2MV58 587 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 ZNF699Q32M78 642 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 NOMO2Q5JPE7 1267 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 SEMA4DQ92854 862 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 GANQ9H2C0 597 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 VRTNQ9H8Y1 702 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 MYO6Q9UM54 1294 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 CAPN11Q9UMQ6 739 aa25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 LUC7L2Q9Y383 392 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-202ENST00000397396 AKR1B15C9JRZ8 316 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 GYPCP04921 128 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 PAX3P23760 479 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 TBXAS1P24557 533 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 POLR2BP30876 1174 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 KCNJ6P48051 423 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 NOP14P78316 857 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 ZBED6P86452 979 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 GCNT1Q02742 428 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 GSTCDQ8NEC7 633 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 VWCEQ96DN2 955 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 DDX27Q96GQ7 796 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 MTIF3Q9H2K0 278 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 SIX2Q9NPC8 291 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 TUBGCP4Q9UGJ1 667 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 SIX4Q9UIU6 781 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 AGAP1Q9UPQ3 857 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 INPP5FQ9Y2H2 1132 aa25.36■■□□□ 1.65
TSPAN4-202ENST00000397396 FGBP02675 491 aa25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 RPL9P32969 192 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 MFAP3P55082 362 aa25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 POLR2FP61218 127 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 TUSC3Q13454 348 aa25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 TSR1Q2NL82 804 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 HELQQ8TDG4 1101 aa25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 SPAG5Q96R06 1193 aa25.35■■□□□ 1.65
TSPAN4-202ENST00000397396 TTC3P53804 2025 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 MFAP3LO75121 409 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms