RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 TPM1P09493 284 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 SYN1P17600 705 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 IBSPP21815 317 aaPredicted RBP10.66□□□□□ -0.7
DDX39B-202ENST00000396172 PAX3P23760 479 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
DDX39B-202ENST00000396172 PPP3CAQ08209 521 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 TRIM14Q14142 442 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 NOMO2Q5JPE7 1267 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 C1orf220Q5T0J3 134 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 C15orf39Q6ZRI6 1047 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 SV2AQ7L0J3 742 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 TAF4BQ92750 862 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 ZNF830Q96NB3 372 aaPredicted RBP10.66□□□□□ -0.7
DDX39B-202ENST00000396172 PPP1R10Q96QC0 940 aaKnown RBP10.66□□□□□ -0.7
DDX39B-202ENST00000396172 GAD1Q99259 594 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 KLK14Q9P0G3 267 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 COQ4Q9Y3A0 265 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 MYH10P35580 1976 aa10.66□□□□□ -0.7
DDX39B-202ENST00000396172 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 ADCY5O95622 1261 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 ACRP10323 421 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDX39B-202ENST00000396172 PNPLA4P41247 253 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 CBWD6Q4V339 395 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 CBWD3Q5JTY5 395 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 CBWD5Q5RIA9 395 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
DDX39B-202ENST00000396172 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 TRAPPC11Q7Z392 1133 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 MYRIPQ8NFW9 859 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 HELQQ8TDG4 1101 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 HERVK_113Q902F9 699 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 PCMTD1Q96MG8 357 aaPredicted RBP10.65□□□□□ -0.7
DDX39B-202ENST00000396172 ZFP42Q96MM3 310 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 FAM193BQ96PV7 902 aaPredicted RBP10.65□□□□□ -0.7
DDX39B-202ENST00000396172 DPP3Q9NY33 737 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 INPP5FQ9Y2H2 1132 aa10.65□□□□□ -0.7
DDX39B-202ENST00000396172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.65□□□□□ -0.72e-17■□□□□ 9.5
DDX39B-202ENST00000396172 PTPRJQ12913 1337 aa10.65□□□□□ -0.71
DDX39B-202ENST00000396172 PTGESO14684 152 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 CLSTN1O94985 981 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 C4BPAP04003 597 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 P4HA1P13674 534 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 ATICP31939 592 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 SCNN1GP51170 649 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 WNT7BP56706 349 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 RNASELQ05823 741 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 MYO1EQ12965 1108 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 TUSC3Q13454 348 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 NCOA4Q13772 614 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 ZBTB6Q15916 424 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 TCTN1Q2MV58 587 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 EPC2Q52LR7 807 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 GLRA4Q5JXX5 417 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 TMEM240Q5SV17 173 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 LMBRD2Q68DH5 695 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF365Q70YC5 407 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 C17orf53Q8N3J3 647 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 LRRC52Q8N7C0 313 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 PHOSPHO2Q8TCD6 241 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 TOP1MTQ969P6 601 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 FAXDC2Q96IV6 333 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 PLCB1Q9NQ66 1216 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 MEFVO15553 781 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 STAU1O95793 577 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 HLA-DRAP01903 254 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 LRPAP1P30533 357 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 RPL9P32969 192 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 RBP5P82980 135 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 SYCP1Q15431 976 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 SPECC1LQ69YQ0 1117 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 OTOP2Q7RTS6 562 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 FMNL3Q8IVF7 1028 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 VSTM4Q8IW00 320 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 C1orf127Q8N9H9 656 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 NEK11Q8NG66 645 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 ZMAT2Q96NC0 199 aaKnown RBP10.64□□□□□ -0.71
DDX39B-202ENST00000396172 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.64□□□□□ -0.719e-25■■■□□ 16.8
DDX39B-202ENST00000396172 RAB20Q9NX57 234 aa10.64□□□□□ -0.71
DDX39B-202ENST00000396172 VWA8A3KMH1 1905 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ARHGEF37A1IGU5 675 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ITGB3P05106 788 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 KRT19P08727 400 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 FGFR1P11362 822 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TRIM21P19474 475 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 PBX1P40424 430 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 SGSM1Q2NKQ1 1148 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF699Q32M78 642 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 FIGNQ5HY92 759 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms