RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 CUL2Q13617 745 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 BTG3Q14201 252 aaPredicted RBP20.59■□□□□ 0.89
CXXC4-201ENST00000394767 ECM1Q16610 540 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 SV2AQ7L0J3 742 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 WDR49Q8IV35 697 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 GABPB2Q8TAK5 448 aaPredicted RBP20.59■□□□□ 0.89
CXXC4-201ENST00000394767 DPH5Q9H2P9 285 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 PTPN22Q9Y2R2 807 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 MCF2LO15068 1137 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 RWDD2BP57060 319 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 CAPSQ13938 189 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 UBN1Q9NPG3 1134 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 ABI2Q9NYB9 513 aaPredicted RBP20.59■□□□□ 0.89
CXXC4-201ENST00000394767 DAAM1Q9Y4D1 1078 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 RALAP11233 206 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 IKBKEQ14164 716 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 SLC35G1Q2M3R5 365 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 C4orf50Q6ZRC1 276 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 CHP1Q99653 195 aa20.59■□□□□ 0.89
CXXC4-201ENST00000394767 TISP43B9A030 160 aa20.58■□□□□ 0.89
CXXC4-201ENST00000394767 KANSL3Q9P2N6 904 aa20.58■□□□□ 0.89
CXXC4-201ENST00000394767 GTF2H1P32780 548 aa20.58■□□□□ 0.89
CXXC4-201ENST00000394767 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
CXXC4-201ENST00000394767 TRAF3IP3Q9Y228 551 aa20.58■□□□□ 0.89
CXXC4-201ENST00000394767 ANKRD63C9JTQ0 380 aa20.58■□□□□ 0.88
CXXC4-201ENST00000394767 PALMO75781 387 aa20.58■□□□□ 0.88
CXXC4-201ENST00000394767 SARSP49591 514 aaKnown RBP20.58■□□□□ 0.88
CXXC4-201ENST00000394767 MYL6P60660 151 aa20.58■□□□□ 0.88
CXXC4-201ENST00000394767 TRIM65Q6PJ69 517 aa20.58■□□□□ 0.88
CXXC4-201ENST00000394767 DHX38Q92620 1227 aaKnown RBP20.58■□□□□ 0.88
CXXC4-201ENST00000394767 IGF2BP3O00425 579 aaKnown RBP eCLIP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 OPA1O60313 960 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 UBA3Q8TBC4 463 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 ZNF512Q96ME7 567 aaPredicted RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 STMN4Q9H169 189 aaPredicted RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 BNIP3LO60238 219 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 GNRH1P01148 92 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 LRRC31Q6UY01 552 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 RBM43Q6ZSC3 357 aaKnown RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 GLIS3Q8NEA6 775 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 ERGIC2Q96RQ1 377 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 TMEM134Q9H6X4 195 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 PGRMC1O00264 195 aaKnown RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 ZRANB2O95218 330 aaKnown RBP eCLIP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 CASP5P51878 434 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 ORC1Q13415 861 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 SREK1Q8WXA9 508 aaKnown RBP20.57■□□□□ 0.88
CXXC4-201ENST00000394767 SIK2Q9H0K1 926 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 MYH13Q9UKX3 1938 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 NDC80O14777 642 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 DNAJC19Q96DA6 116 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 GAD1Q99259 594 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 HINFPQ9BQA5 517 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 CDC23Q9UJX2 597 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 MROH7Q68CQ1 1323 aa20.57■□□□□ 0.88
CXXC4-201ENST00000394767 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 LYPLA2O95372 231 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 MYBL1P10243 752 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 IRX5P78411 483 aaPredicted RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 SH3RF1Q7Z6J0 888 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 TRPC7Q9HCX4 862 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 PLCB1Q9NQ66 1216 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 RNF19AQ9NV58 838 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 PARVAQ9NVD7 372 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 KRT3P12035 628 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 BRD2P25440 801 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 NPLOC4Q8TAT6 608 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 ITIH6Q6UXX5 1313 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 RTN2O75298 545 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 AMHP03971 560 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 PNMA6AP0CW24 399 aaPredicted RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 PON1P27169 355 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 CDK17Q00537 523 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 NPY5RQ15761 445 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 TMEM161BQ8NDZ6 487 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 EIF3CLB5ME19 914 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 RECQL4O94761 1208 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 BCAR1P56945 870 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 FBXO47Q5MNV8 452 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 DARS2Q6PI48 645 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 KRT12Q99456 494 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 EIF3CQ99613 913 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 ASB7Q9H672 318 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 ZBTB22O15209 634 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 CREB3O43889 395 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 CD52P31358 61 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 TMEM199Q8N511 208 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 DDX27Q96GQ7 796 aaKnown RBP20.56■□□□□ 0.88
CXXC4-201ENST00000394767 HES2Q9Y543 173 aa20.56■□□□□ 0.88
CXXC4-201ENST00000394767 XPAP23025 273 aaPredicted RBP20.55■□□□□ 0.88
CXXC4-201ENST00000394767 MMS22LQ6ZRQ5 1243 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ZCCHC17Q9NP64 241 aaKnown RBP20.55■□□□□ 0.88
CXXC4-201ENST00000394767 LMNB2Q03252 620 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 TMC7Q7Z402 723 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ACOT1Q86TX2 421 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms