RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HYIQ5T013 277 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 DTHD1Q6ZMT9 781 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 CEP120Q8N960 986 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 KCNN1Q92952 543 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 GOLGA2P5Q9HBQ8 144 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 KCND2Q9NZV8 630 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 KIF3AQ9Y496 699 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 E9PMD0 336 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 H7C4K7 107 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 PODXLO00592 558 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 ECI2O75521 394 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 DCNP07585 359 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 ROR1Q01973 937 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 MLF2Q15773 248 aaPredicted RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 VARS2Q5ST30 1063 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 TPGS2Q68CL5 300 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 TCEAL8Q8IYN2 117 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 ZMAT2Q96NC0 199 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 MMTAG2Q9BU76 263 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 TARS2Q9BW92 718 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 HCFC1R1Q9NWW0 138 aa19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 MRPS23Q9Y3D9 190 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-202ENST00000394082 TOM1L1O75674 476 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 RHOP08100 348 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 SP9P0CG40 484 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 PTPN2P17706 415 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 BRCC3P46736 316 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 IL17AQ16552 155 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 ZNF528Q3MIS6 628 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC44A4Q53GD3 710 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 RILPL1Q5EBL4 403 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 ZPBP2Q6X784 338 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 ERMP1Q7Z2K6 904 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 NELL2Q99435 816 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 TCHPQ9BT92 498 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 DMXL1Q9Y485 3027 aa19.14■□□□□ 0.65
SNRPA1-202ENST00000394082 FANCMQ8IYD8 2048 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 WDR27A2RRH5 827 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 LRG1P02750 347 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 GLULP15104 373 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SCP2P22307 547 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 ELF1P32519 619 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SMTNP53814 917 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 STRN3Q13033 797 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SNW1Q13573 536 aaKnown RBP19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SPECC1Q5M775 1068 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SYT2Q8N9I0 419 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 SUSD3Q96L08 255 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 BCO2Q9BYV7 579 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 PLEKHA5Q9HAU0 1116 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 CITO14578 2027 aa19.13■□□□□ 0.65
SNRPA1-202ENST00000394082 PP2D1A8MPX8 630 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 I3L4J1 428 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 ZNF197O14709 1029 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC26A4O43511 780 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 PLS3P13797 630 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 OSTNP61366 133 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 ATP2C1P98194 919 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 KCNK18Q7Z418 384 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 TMEM161BQ8NDZ6 487 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 APPL2Q8NEU8 664 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 ELSPBP1Q96BH3 223 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 OXCT2Q9BYC2 517 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 FBXO4Q9UKT5 387 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 NUB1Q9Y5A7 615 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 MIA3Q5JRA6 1907 aa19.12■□□□□ 0.65
SNRPA1-202ENST00000394082 H0YCG3 227 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 PRRG1O14668 218 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC16A4O15374 487 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 MAPTP10636 758 aaKnown RBP19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 CDC25AP30304 524 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 MCL1Q07820 350 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC5A9Q2M3M2 681 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC10A6Q3KNW5 377 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 PRSS36Q5K4E3 855 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 ARL6IP4Q66PJ3 421 aaKnown RBP19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 MAML2Q8IZL2 1156 aaPredicted RBP19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 LEMD2Q8NC56 503 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 DNASE1L2Q92874 299 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 CLDN23Q96B33 292 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 TSPAN18Q96SJ8 248 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 KXD1Q9BQD3 176 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 FBXL5Q9UKA1 691 aa19.11■□□□□ 0.65
SNRPA1-202ENST00000394082 EP300Q09472 2414 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 RPS9P46781 194 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 ID4P47928 161 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 KYAT1Q16773 422 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 ZNF280DQ6N043 979 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 ST13P5Q8NFI4 369 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 LTB4R2Q9NPC1 389 aa19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 LARSQ9P2J5 1176 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-202ENST00000394082 AFF4Q9UHB7 1163 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms