RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ODC1P11926 461 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 PLS3P13797 630 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 CPA1P15085 419 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 YWHAQP27348 245 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 GNA15P30679 374 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 HALP42357 657 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 SERPINB9P50453 376 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 SNRPFP62306 86 aaKnown RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 MAPK8IP2Q13387 824 aaPredicted RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 PLCL1Q15111 1095 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 PDK1Q15118 436 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 TRIP4Q15650 581 aaPredicted RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 C6orf10Q5SRN2 563 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 ANO5Q75V66 913 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 RDM1Q8NG50 284 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 EAF2Q96CJ1 260 aaPredicted RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 C18orf8Q96DM3 657 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 DEPDC7Q96QD5 511 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 PANX2Q96RD6 677 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 NFKBIZQ9BYH8 718 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 FRMD8Q9BZ67 464 aaPredicted RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 TRIM4Q9C037 500 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 BRD8Q9H0E9 1235 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 TMEM60Q9H2L4 133 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 NDST4Q9H3R1 872 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 GOLPH3LQ9H4A5 285 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 CYP39A1Q9NYL5 469 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 FBXO10Q9UK96 956 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 UBQLN1Q9UMX0 589 aaKnown RBP4.19□□□□□ -1.74
UBR3-202ENST00000392632 ATP8A1Q9Y2Q0 1164 aa4.19□□□□□ -1.74
UBR3-202ENST00000392632 MLH3Q9UHC1 1453 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 DFFAO00273 331 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 APOL1O14791 398 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 NKRFO15226 690 aaKnown RBP eCLIP4.18□□□□□ -1.74
UBR3-202ENST00000392632 CTNND1O60716 968 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 SOAT2O75908 522 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CTSHP09668 335 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 MUTP22033 750 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 IGFBP4P22692 258 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 HOXA13P31271 388 aaPredicted RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 HMGCS2P54868 508 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 INHBEP58166 350 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 R3HDM1Q15032 1099 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 ME3Q16798 604 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ALG11Q2TAA5 492 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ZNF394Q53GI3 561 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 DEPDC1Q5TB30 811 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 RETSATQ6NUM9 610 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 MTSS1LQ765P7 747 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 LUZP2Q86TE4 346 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CDK20Q8IZL9 346 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 SAMD3Q8N6K7 520 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 DDI1Q8WTU0 396 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 MAML1Q92585 1016 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ARHGEF26Q96DR7 871 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 USP28Q96RU2 1077 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CNPY3Q9BT09 278 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 STARD7Q9NQZ5 370 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 PARVAQ9NVD7 372 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 GEMIN8Q9NWZ8 242 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 ZC3H7BQ9UGR2 993 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 ATP6V1HQ9UI12 483 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 APPL1Q9UKG1 709 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 PPP2R2CQ9Y2T4 447 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 MAP3K1Q13233 1512 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ABCC4O15439 1325 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 JAK2O60674 1132 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ANXA9O76027 345 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ASS1P00966 412 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 AMHP03971 560 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 TNNI3P19429 210 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 SLC1A1P43005 524 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CARSP49589 748 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 CLK3P49761 638 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 VAMP7P51809 220 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CSTF3Q12996 717 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 MRPL28Q13084 256 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 TCEA2Q15560 299 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 SGSM1Q2NKQ1 1148 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 C10orf120Q5SQS8 335 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 TRIM68Q6AZZ1 485 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ZNF280DQ6N043 979 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CEP68Q76N32 757 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 LINC00523Q86TU6 105 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 RGL4Q8IZJ4 473 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ANKRD13CQ8N6S4 541 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ZNF655Q8N720 491 aaPredicted RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 FAM133AQ8N9E0 248 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ST13P5Q8NFI4 369 aaPredicted RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 SPATA18Q8TC71 538 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 PABPC5Q96DU9 382 aaKnown RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 C19orf60Q96EN9 201 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 VMP1Q96GC9 406 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 FAR2Q96K12 515 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 GAS2L1Q99501 681 aaPredicted RBP4.18□□□□□ -1.74
UBR3-202ENST00000392632 OSBPL1AQ9BXW6 950 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 CCDC90BQ9GZT6 254 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 ZMYND12Q9H0C1 365 aa4.18□□□□□ -1.74
UBR3-202ENST00000392632 MROH8Q9H579 483 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms