RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PRSS55Q6UWB4 352 aaPredicted RBP12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 GPR149Q86SP6 731 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 TMEM87AQ8NBN3 555 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 DHX58Q96C10 678 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 NECTIN4Q96NY8 510 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 LRRC27Q9C0I9 530 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 MAGEF1Q9HAY2 307 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 ADAM12O43184 909 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TGM5O43548 720 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TRAPPC3O43617 180 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 GLUD1P00367 558 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 MYBP10242 640 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 IDEP14735 1019 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 RPL17P18621 184 aaKnown RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 CMA1P23946 247 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 SSTR3P32745 418 aaPredicted RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 HOXD13P35453 343 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 MATR3P43243 847 aaKnown RBP eCLIP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 BRCC3P46736 316 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 AARSP49588 968 aaKnown RBP eCLIP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 AMPD3Q01432 767 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 ALCAMQ13740 583 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 POSTNQ15063 836 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 PSMD5Q16401 504 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 CES5AQ6NT32 575 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 RSPO2Q6UXX9 243 aaPredicted RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TMC5Q6UXY8 1006 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 CD302Q8IX05 232 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZNF707Q96C28 371 aaPredicted RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 SUSD3Q96L08 255 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 POMKQ9H5K3 350 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 RPF1Q9H9Y2 349 aaKnown RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 C11orf16Q9NQ32 467 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 MAN1C1Q9NR34 630 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TBC1D7Q9P0N9 293 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 MTRRQ9UBK8 725 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
IGHV4-28-201ENST00000390612 I3L4J1 428 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 SYN3O14994 580 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 GCNT3O95395 438 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 GARTP22102 1010 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 ACOT2P49753 483 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 KRT85P78386 507 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 SPAG1Q07617 926 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 RAB33AQ14088 237 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 ATAT1Q5SQI0 421 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 PALB2Q86YC2 1186 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 ASB7Q9H672 318 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 KCNH3Q9ULD8 1083 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 UBQLN1Q9UMX0 589 aaKnown RBP12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 DERAQ9Y315 318 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 TSC2P49815 1807 aa12.39□□□□□ -0.43
IGHV4-28-201ENST00000390612 ANO9A1A5B4 782 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 M0QZQ0 153 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 DCXO43602 365 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 GPR37L1O60883 481 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 PRPF6O94906 941 aaKnown RBP12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 WEE2P0C1S8 567 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 SPATA31D3P0C874 917 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 ALADP13716 330 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 BECN1Q14457 450 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 SPATA31D4Q6ZUB0 917 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 UNC13DQ70J99 1090 aa12.38□□□□□ -0.43
IGHV4-28-201ENST00000390612 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms